KEGG   Rattus norvegicus (rat): 170796
Entry
170796            CDS       T01003                                 
Symbol
Grin3b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B precursor
  KO
K05214  glutamate receptor ionotropic, NMDA 3B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04020  Calcium signaling pathway
rno04024  cAMP signaling pathway
rno04080  Neuroactive ligand-receptor interaction
rno04724  Glutamatergic synapse
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05030  Cocaine addiction
rno05031  Amphetamine addiction
rno05033  Nicotine addiction
rno05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    170796 (Grin3b)
   04024 cAMP signaling pathway
    170796 (Grin3b)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    170796 (Grin3b)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    170796 (Grin3b)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    170796 (Grin3b)
   05020 Prion disease
    170796 (Grin3b)
  09165 Substance dependence
   05030 Cocaine addiction
    170796 (Grin3b)
   05031 Amphetamine addiction
    170796 (Grin3b)
   05033 Nicotine addiction
    170796 (Grin3b)
   05034 Alcoholism
    170796 (Grin3b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    170796 (Grin3b)
Ion channels [BR:rno04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   170796 (Grin3b)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor
Other DBs
NCBI-GeneID: 170796
NCBI-ProteinID: NP_579842
RGD: 621705
Ensembl: ENSRNOG00000012562
UniProt: Q8VHN2
Structure
Position
7:complement(10381495..10387817)
AA seq 1002 aa
MESVRTLWLSVALALAVGSRVVRGHPQPCRVPTRAGASVRLAALLPRAPAARARVLAALA
TPAPRLPHNLSLELVAVASPTRDPASLARGLCQVLAPPGVVASIAFPEARPELRLLQFLA
AATETPVVSVLRREVRTALGAPTPFHLQLDWASPLETILDVLVSLVRAHAWEDIALVLCR
VRDPGSLVTLWTNHASQAPKFVLDLSRLDSRNDSLRAGLALLGALEGGGTPVPAAVLLGC
STARAHEVLEAAPPGPQWLLGTPLPAEALPTTGLPPGVLALGETEQHSLEAVVHDMVELV
AQALSSMALVHPERALLPAVVNCDDLKTGGSEATGRTLARFLGNTSFQGRTGAVWVTGSS
QVHVSRHFKVWSLRRDPLGAPAWATVGSWQDGQLDFQPGAAALRVPSPSGTQARPKLRVV
TLVEHPFVFTRESDEDGQCPAGQLCLDPGTNDSARLDALFAALVNGSVPRTLRRCCYGYC
IDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSARSQ
VVDFTSPFFSTSLGIMVRTRDTASPIGAFMWPLHWSMWVGVFAALHLTALFLTLYEWRSP
YGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCLLVLSSY
TANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEAYIKASFPEMHAHMRRH
SAPTTPHGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQN
SPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMGVYHFSGLFVLLCL
GLGSALLTSLGEHVFYRLVLPRIRRGNKLQYWLHTSQKIHRALNTGPPEGQQERAEQERS
GPKDELPATDGAGRWRRVRRAVERERRVRFLLEPGEAGGDRPWLCSNGPGLQAELRELEL
RIEAARERLRSALLRRGELRALLGDGTRLRPLRLLHAAPAES
NT seq 3009 nt   +upstreamnt  +downstreamnt
atggagagtgtgcggacgctgtggctcagcgtggccctggcgctggcggtggggtcccga
gtggtgcgcggtcaccctcagccctgccgggttcccacgcgcgctggggcctccgtgcgc
ctggcggcgctcctgccccgggcgcccgccgcccgcgcccgcgtcctagctgccctggcc
acccctgcgccgcggctgccgcacaacctgagtctggaactggtggccgtcgcgtccccg
acccgggaccccgcgtcgctagctcgaggtctgtgccaggttctggcaccgcctggcgtg
gtggcctctatagcctttcccgaggcgcggcccgagctgcggctactgcagttcctggca
gccgccacagagaccccagtggtgagcgtcctgcggagggaggtgcgcacggccctcgga
gccccgactccgttccatctgcagctggactgggctagtcccctggagaccatactggat
gtgctggtgtccctggtacgggcacatgcctgggaggacattgctctagtactctgccgt
gtccgggaccctggcagcctggtgacactctggactaaccatgctagccaggctccaaag
tttgtgctggacctgagccggctggacagcaggaatgacagccttcgggctggactggcc
ctgttgggggcgctggaaggagggggaaccccagtgcctgcagcagtcctcctaggctgc
agcactgcccgtgcacatgaggtcctagaggctgcaccaccgggtccccagtggttgctg
ggcacaccattgcccgctgaggcactgcccacgactggtctgccacctggcgtgctggcg
ctgggggaaaccgaacaacactctctggaagctgtcgtccacgacatggtggagcttgtg
gctcaggcactcagtagcatggcccttgtacacccagagcgggcactgcttccagctgtg
gtgaactgtgatgacctgaaaacaggcggatctgaggcaacagggcgcaccttggctcgg
tttctcggcaacacctcatttcagggccgaacaggggccgtgtgggtgacaggctcctct
caggtgcatgtgtctcggcatttcaaggtatggagcctgcgccgggatccgctgggtgcc
ccagcctgggcaaccgtgggcagctggcaggatggacagctggacttccagccaggggca
gccgctctccgagtcccatctccgtctggcacccaggcccgaccaaagctgcgtgtggta
accctggtggaacacccgtttgtgttcaccagggaatctgatgaagacggacagtgccca
gctgggcagctgtgtctggacccaggcaccaatgactcagccaggctggatgccctcttt
gctgcactggtgaatggctcagtacctcgaacgctgagaagatgctgctatggctactgc
atcgacctgctggagcggctggccgaggacctggcctttgactttgagctctatattgtg
ggggatggcaagtacggggccctgcgtgatgggcgctggacgggcctggtgggtgacctg
ctggctggccgggcacacatggctgtgaccagcttcagcatcaactcagctcgctctcag
gtggtggatttcaccagccctttcttctccaccagcctggggattatggtgcgcacgaga
gacacggcctcgcccatcggggctttcatgtggcccctgcactggtccatgtgggtgggc
gtgtttgctgctctgcacctcacagcgctctttctcaccctgtacgaatggcgaagtccc
tacgggctcacgccgcgcggccgcaaccgtggcactgtcttctcttactcctccgcgctc
aacctgtgctatgccattctctttggacgcactgtctccagtaagacgcccaagtgccct
actggacgcttcctcatgaacctctgggcaatcttctgcctgctggtgctttccagttac
acggccaacctggctgctgtcatggttggggacaaaacctttgaggagctgtctggaatc
catgatcccaagctgcaccacccttcccaaggctttcgctttggcaccgtatgggagagc
agcgcggaggcctacatcaaggcaagcttccctgagatgcacgcacacatgcgtcggcac
agcgcacccaccactccacatggggtggccatgctcacgagcgacccgcccaagctcaac
gccttcatcatggataaatcactactggactatgaggtgtccatagatgcggactgcaag
ctgctcaccgttggcaaaccctttgctatcgagggctacggcatagggctaccccaaaac
tcgccgctcacctccaacctgtcggagttcatcagtaggtacaagtcttcaggcttcatt
gatctgctccatgacaagtggtacaagatggtgccttgcgggaagcgggtgttcgccgtg
acggagacgctgcagatgggggtctaccacttctcaggattgtttgtcctgctgtgcctc
gggctgggcagcgcgcttctcacctctctgggtgagcatgtcttctaccgcctggtgctg
ccgcgcatccgcaggggtaataagctgcagtattggcttcacacgagccagaagatccac
cgagccctcaatacaggaccacccgaggggcaacaggagagggcagagcaggagcgcagc
ggccccaaggacgagctgcctgccaccgatggtgcagggcgctggaggcgggtgcgccgg
gctgtggaacgggagcgacgcgtgcgtttcctgctggaacctggggaggctggcggagac
cgcccgtggctctgctccaacgggcccgggctgcaagcggagctgcgggagctggagctg
cgcattgaggctgcacgggagcggctgcgcagtgcgctgttgcggcgcggggagctgcgg
gccctgcttggggatggcacccggctcaggccactgcgcctgttgcatgcggcgcctgct
gagagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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