KEGG   Rattus norvegicus (rat): 170808
Entry
170808            CDS       T01003                                 
Symbol
Capn8
Name
(RefSeq) calpain-8
  KO
K08577  calpain-8 [EC:3.4.22.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    170808 (Capn8)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C2: calpain family
   170808 (Capn8)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_7 EF-hand_8 Alpha_adaptin_C
Other DBs
NCBI-GeneID: 170808
NCBI-ProteinID: NP_579843
RGD: 620085
Ensembl: ENSRNOG00000003468
UniProt: Q78EJ9
Position
13:96783640..96847825
AA seq 703 aa
MAALAAGVSKQRAVAEGLGSNQNAVKYLGQDFETLRKQCLNSGVLFKDPEFPACPSALGY
KDLGPGSPDTQGIVWKRPTELCPNPQFIVGGATRTDIRQGGLGDCWLLAAIASLTLNEKL
LYRVLPRDQSFQKDYAGIFHFQFWQYGEWVEVVIDDRLPTKNGQLLFLHSEEGNEFWSAL
LEKAYAKLNGSYEALVGGSTIEGFEDFTGGISEFYDLKKPPENLYYIIQKALRKGSLLGC
SIDVSTAAEAEATTRQKLVKGHAYSVTGVEEVNFHGRPEKLIRLRNPWGEVEWSGAWSDN
APEWNYIDPRRKEELDKKAEDGEFWMSFSDFLKQYSRLEICNLSPDSLSSEEIHKWNLVL
FNGRWTRGSTAGGCLNYPGTYWTNPQFKIHLDEVDEDQEEGTSEPCCTVLLGLMQKNRRR
QKRIGQGMLSIGYAVYQIPKELESHTDAHLGRDFFLGRQPSTCSSTYMNLREVSSRVRLP
PGQYLVVPSTFEPFKDGDFCLRVFSEKKAKALEIGDTVSGHPHEPHPRDMDEEDEHVRSL
FEEFVGKDSEISANQLKRVLNEVLSKRTDMKFDGFNINTCREMISLLDSDGTGSLGPMEF
KTLWLKIRTYLEIFQEMDHNHVGTIEAHEMRTALKKAGFTLNNQVQQTIAMRYACSKLGV
DFNGFVACMIRLETLFKLFRLLDKDQNGIVQLSLAEWLCCVLV
NT seq 2112 nt   +upstreamnt  +downstreamnt
atggcagctctggcagcgggagtatccaagcaacgtgcagttgctgaggggcttggctct
aaccagaatgctgtgaagtatctgggccaggacttcgagaccctgaggaagcagtgcttg
aactcgggggtcctatttaaggacccagaatttccagcatgtccatcagctttgggctac
aaggatctaggaccaggctccccagacactcaaggcatcgtatggaagcgacccacggaa
ttgtgtcccaaccctcagtttattgttggtggagccacacgcacagacatccgccaaggg
ggtcttggagactgctggcttctagcagccattgcctccctcaccttgaatgaaaagctg
ctttaccgggtgcttcccagggaccagagcttccagaaggactacgcgggcatatttcat
ttccagttctggcagtatggagagtgggtggaggtggtcattgatgaccggctccccacc
aagaacgggcagctgctttttctacactccgaagaaggcaatgagttttggagcgctctg
ctggagaaagcctatgccaagctaaatggttcatatgaggctcttgttggaggctccaca
atcgaggggtttgaggatttcacaggtggcatctctgagttttatgacttgaagaagcct
ccggaaaatctgtactacatcatccagaaggccctccgcaaaggctctctgctgggctgc
tccattgatgtctcaactgcagctgaagcagaagccaccaccaggcaaaagctggttaag
ggtcatgcatactctgttactggagtcgaagaggtgaatttccatggccgtccagagaag
ctgatcaggttgaggaacccgtggggtgaagtggagtggtcgggagcctggagtgataat
gcacctgagtggaattacatagatccaaggaggaaggaggagctggacaagaaagcagaa
gatggcgagttctggatgtccttttcggatttcttgaagcagtactcccgactggagatc
tgcaacctgtccccagactctctgagcagtgaagagatacacaaatggaacctagtactc
ttcaacggccgctggacacggggttctacagccgggggctgcctgaactacccaggcacg
tactggaccaacccccagtttaaaatccatttggatgaggtggatgaggaccaggaggag
ggcaccagtgaaccctgctgtaccgtgctgctgggtctgatgcagaagaatcgaagacgt
caaaagaggatcggccagggcatgctcagcataggctacgctgtctaccagattcccaag
gagttggagagtcacacggatgcacaccttggccgggacttcttcctgggacgccagccc
tctacctgctccagcacttacatgaaccttcgggaggtgtccagcagggtccgactcccc
ccgggacagtacctggtggtgccatccaccttcgagcccttcaaggatggtgacttctgc
ttgagggtgttctcagagaagaaggccaaggctctggaaattggggatactgtatctgga
caccctcatgagccacatccccgtgacatggatgaagaagatgaacatgtccggagcctg
tttgaggagtttgtgggcaaggattctgagatcagtgctaatcagctcaagagggtcctg
aatgaagtactttctaaacgaacagacatgaaatttgatggattcaacatcaacacttgc
agagaaatgatcagcctgctggatagtgatgggacaggaagcctgggacctatggagttc
aagactctctggctgaagatccgcacatatctggagatcttccaagaaatggaccataac
catgtagggaccattgaagcccatgagatgaggacagctctcaagaaagcaggtttcacc
ctcaacaaccaggtgcagcagaccattgccatgaggtatgcgtgcagtaagcttggtgtt
gacttcaacggttttgtggcgtgtatgatccgcctggagaccctgttcaaactgttcagg
cttttggataaggaccagaatggcattgtccagctctccctggctgagtggctgtgctgt
gtgctggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (13)   
   RefSeq(nuc) (7)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (38)   

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