KEGG   Rattus norvegicus (rat): 170820
Entry
170820            CDS       T01003                                 
Symbol
Prdm4
Name
(RefSeq) PR domain zinc finger protein 4
  KO
K12463  PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04722  Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    170820 (Prdm4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    170820 (Prdm4)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    170820 (Prdm4)
SSDB
Motif
Pfam: PRDM2_PR zf-H2C2_2 zf_PR_Knuckle zf-C2H2 zf-C2H2_4 SET zf-C2H2_jaz zf-met Mu-like_Com PyrI_C HypA
Other DBs
NCBI-GeneID: 170820
NCBI-ProteinID: NP_579846
RGD: 619929
Ensembl: ENSRNOG00000004962
UniProt: Q9QZP2
Position
7:19841560..19868224
AA seq 798 aa
MNDMNLSPVGMEQLSSSSVSNALPVSGSHLGLAASPSHSAIPAPGLPVAIPNLGPSLSSL
PSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRPPPQY
IHPNSINVDGNTALSITNNPSALDPYQANGNVGLELGIVSIDSRSVNTHGAQSLHPNDGH
EVALDTTITMENVSRVTSPISTDGMAEELTMDGVTGEHSQIPNGSRSHEPLSVDSVSNNL
TADTVGHGGVIPIHGNGLELPVVMETDHIANRVNGISDSVLSDSIHTVAMSTNSVSVALS
TSHNLASLESVSLQEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPSSLQMEDSNS
NKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSIVGTD
VGVWTAETIPVRTCFGPLIGQQSHSMEVAEWTDKAVSHVWKIYHNGVLEFCIITTDENEC
NWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQIGVPEHPDV
HLCNCGKECSSYSEFKAHLTSHIHNHLPSQGHSSSHGPSHSKERKWKCSMCPQAFISPSK
LHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAHLESH
MVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKHLNSH
EGRRDYVCEKCTKAYLTKYHLTRHLKACKEPASSSSAQDDEDEDGDSGEDGLPGSMTTEG
CRMSSAVYSADESLSAHK
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgaatgacatgaacttgagcccagtggggatggagcagctgtcttcatcctctgtgagc
aatgccctgccagtctcaggaagtcacctgggtctggctgcctctccctctcacagtgcc
atccctgccccaggacttccagtggcaattccaaacctcggtccctccctgagctctctg
ccttctgccttgtctctgatgctccccatgggcattggagatcgaggagtaatgtgtggg
ttacctgaaagaaactataccctacctccaccaccttaccctcacctagagagcagttac
ttcagaaccattctacctggcattttatcttatttagctgacagaccacctcctcagtat
atccaccccaactctataaatgttgatggaaatacagcattatctatcaccaacaaccct
tcggcactagatccctatcaggccaatggaaatgttggattagaactaggcattgtttca
atagactctcgctctgtaaacactcatggtgcccaaagtcttcatcctaatgatggccac
gaagtagcattggacacaacaatcactatggagaatgtctctagggttaccagcccaatc
tccacagacggaatggcagaggaacttacaatggatggagttacaggagaacattcccag
atcccaaatggctccagaagtcatgaacccctctctgtggattctgtgagcaacaacctt
acagctgacactgtaggacatggtggtgtgatacccattcatgggaatggtctggagctt
ccagtggtcatggagacagaccacattgcaaaccgggtcaatgggatatctgacagcgtc
ctcagtgattccatccacaccgtggccatgagcaccaactctgtaagcgtggcactttct
acctcacacaacctcgcctccctagaatctgtttccctccaggaagttggccttagccta
gagcctgtggctgtctcttccatcacccaggaagttgccatggggacaggtcatgtagat
gtatcctcagacagcttgtcttttgtaccatcttcactgcaaatggaagactccaattca
aacaaggaaaacatggcaaccttgtttacaatttggtgcacgctttgtgaccgagcctac
ccctcagattgccctgatcatggaccagtgacttttgttcctgatacaccaatagagagc
agagcaagactatccctcccgaagcagcttgttctccgccagtccattgtggggacagat
gttggcgtgtggactgcagagaccattcccgtgcggacttgcttcgggcctctaattggc
cagcagagtcactccatggaagtggcggagtggacagacaaggccgttagccacgtctgg
aagatataccacaatggcgtcctagaattctgcatcattacaaccgatgagaatgagtgt
aattggatgatgtttgtgcgcaaagccaggaaccgtgaagaacagaatttggtggcttat
ccccatgatggaaaaatctatttctgtacctcacaagacatccctcctgaaaacgagctg
cttttctattatagccgggattatgctcaacagataggtgttcctgaacaccccgatgtg
cacctctgtaactgtggcaaggagtgcagttcctattcagagttcaaagctcacctgacc
agccatatccacaatcatctccctagccagggccacagcagcagccatgggccaagccac
agcaaggaaaggaagtggaagtgctccatgtgcccccaggcctttatttctccttctaaa
ctccacgttcactttatgggtcatatgggcatgaagccccacaagtgtgatttttgtagc
aaggcttttagtgatccaagcaacctacggacacacctcaaaatacatacaggtcagaag
aattacaggtgtactttgtgtgacaagtctttcacgcagaaggctcacttggaatctcac
atggtcatccacacgggtgagaagaatctcaagtgtgattactgtgacaagctattcatg
cggagacaggacctcaagcagcatgtgctcatccacacacaagaacgccagatcaagtgt
ccgaagtgtgataaactgttcctgagaacaaaccacttgaagaagcatctcaactctcac
gagggaagacgagactatgtctgtgagaaatgcacaaaggcttacctaaccaagtaccac
ctcacccgccacctgaaggcctgcaaggagcccgcctccagctcctccgcccaggacgat
gaggacgaggatggggactcgggggaagacggtctcccaggctccatgacgacagagggc
tgcaggatgagcagtgctgtttactcagcagatgagtctctctccgcacataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (41)   

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