KEGG   Rattus norvegicus (rat): 170842
Entry
170842            CDS       T01003                                 
Symbol
Tob1
Name
(RefSeq) protein Tob1
  KO
K14443  protein Tob/BTG
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    170842 (Tob1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    170842 (Tob1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     170842 (Tob1)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     170842 (Tob1)
SSDB
Motif
Pfam: BTG PAM2 TFIIA YjbH DUF2076 CCDC53 TERB2 Spt20_SEP CobT
Other DBs
NCBI-GeneID: 170842
NCBI-ProteinID: NP_579851
RGD: 621126
Ensembl: ENSRNOG00000002828
UniProt: M0R3X4 A6HI38
Position
10:79659993..79662031
AA seq 366 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKQKYEGHWYPEKPYKGSGFRCIHV
GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDSNEN
GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
TFAATKFGSTKMKNSGRSSKVARTSPISLGLNVNVNDLLKQKAISSSMHSLYGLGLGSQQ
QPQPQPQQPPSQPPPPPPPPQQQQQQQQQQQQQQQQQQQQPQQQTSALSPNAKEFIFPNM
QGQGSSTNGMFPGDSPLNLSPLQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNIQYSNQQF
QPVMAN
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgcagcttgaaattcaagtagcactaaattttattatttcctatttgtacaataagctt
cccaggagacgtgtcaacatttttggtgaagaacttgaaagacttcttaaacagaaatat
gaagggcattggtatcctgagaagccatacaaaggctcagggtttagatgcatacacgta
ggggagaaggtggacccggtgatcgagcaagcgtccaaagagagtggtctggacattgac
gatgttcgtggcaatctgccgcaggatctgagcgtgtggatcgacccgtttgaggtttcc
taccaaatcggtgagaagggaccagtgaaggtgctgtacgtagatgacagtaatgagaac
gggtgtgagctggataaggagatcaagaacagctttaaccctgaggcccaggttttcatg
cccataagcgacccagcctcctctgtgtccagctcgccgtcgcctccctttggccattct
gctgccgtcagccccaccttcatgccccggtccactcagcctttaacctttaccactgcc
acttttgctgccaccaagtttggctccaccaaaatgaagaacagtggccgtagcagcaag
gtagcacgcacttctcccatcagcctgggcctgaatgtcaatgtgaacgacctcctgaag
cagaaagccatctcttcctcaatgcactctctgtacgggctgggcctgggcagccagcag
cagcctcagccgcagccgcagcagccgccatcccagccaccaccgccgccaccacctcca
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcag
ccgcagcagcaaacctctgctctttctcccaatgccaaggaatttatttttcctaacatg
cagggtcaaggtagtagtaccaatggaatgttcccaggtgacagcccccttaacctcagt
cccctccagtacagtaatgcctttgatgtgtttgcggcctacggaggcctcaacgagaag
tctttcgtagacggcttgaattttagcttaaataacattcagtattctaaccagcagttc
cagcccgtaatggctaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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