KEGG   Rattus norvegicus (rat): 170844
Entry
170844            CDS       T01003                                 
Symbol
Taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
  KO
K03128  transcription initiation factor TFIID subunit 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    170844 (Taf2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    170844 (Taf2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    170844 (Taf2)
   03036 Chromosome and associated proteins [BR:rno03036]
    170844 (Taf2)
Peptidases and inhibitors [BR:rno01002]
 Metallo peptidases
  Family M1
   170844 (Taf2)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     170844 (Taf2)
   Coactivators
    SAGA/TFTC/STAGA complex
     170844 (Taf2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     170844 (Taf2)
SSDB
Motif
Pfam: HEAT_2 Peptidase_M1_N Peptidase_M1
Other DBs
NCBI-GeneID: 170844
NCBI-ProteinID: NP_579853
RGD: 621487
Ensembl: ENSRNOG00000034022
UniProt: F1LNY6
Position
7:complement(88312374..88369399)
AA seq 1200 aa
MPPTGLESSRMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYVLAI
PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYHHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTYGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVV
AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDASLFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEELQWLLNMIQTDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSG
TAHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAGVGNQET
ASNPGCHTQLAGFQNPFSSSQDEEEVDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPSS
SRSSLMPQHALGCDITPTTKPQWSMELSRKGAGKEQPLEMGVHPVAAPLSVFAKEALSSA
RHSEHHHHHHHEHKKKKKKHKHKHKHKHKHDGKDKDKDKEPFTFSSPASGRSVRSPSLSD
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgccgcccaccggcttagagtcctccaggatgaacaggaagaaaggagacaagggcttc
gaaagcccacggccgtacaaattaacccatcaggtcgtctgcatcaacaacataaacttc
cagagaaagtctgttgtggggtttgtggagctgactatatttcctacggttgcaaacttg
aatagaatcaagctgaacagtaaacagtgtagaatataccgagtcaggatcaatgacttg
gaggctgcttttatttataatgatccaaccttagaagtttgtcacagcgaatcaaaacag
agaaacctcaattatttttccaatgcgtatgcagctgcagtcagtgctgtggaccctgat
gcggggaacggagaactctgcattaaggtcccctcagagctctggaagcacgtcgatgag
ttaaaggtcctgaagatacatattaatttttctttggatcagccaaaaggaggtcttcat
tttgtggtacccagtgtagaggggagtatggcagagagaggtgctcatgtcttctcttgt
gggtatcagaattctacaagattttggttcccttgtgttgattcatactctgagttgtgt
acctggaaattagaatttacagtcgatgctgcgatggtggctgtgtccaatggagatttg
gtggagacagtgtatactcacgacatgagaaagaagaccttccattatgtgcttgctatt
cctacagcagcgtccaatatctccttggccatcgggccatttgaaatacttgtagatcca
tatatgcacgaggttacccatttttgtttgcctcaacttcttccattacttaaacatact
acatcataccttcacgaagtttttgaattttatgaggaaattttgacttgtcgctatccg
tactcctgttttaagacggtcttcattgatgaggcttacgtggaagtggccgcttatgcg
tctatgagcattttcagcacaaatctcctgcacagcgccatgattatagatgagacaccg
ctcaccaggcggtgcctcgcacagtctctagcacagcagttcttcggatgtttcatctcc
agaatgtcttggtctgatgagtgggtgctgaagggaatttcaggttatatttatggactg
tggatgaagaaaacgtttggtgtcaatgagtaccaccattggattaaagaggaactcgat
aaaatagtggcatatgaactgaaaactgggggagttttactgcatcccatatttggtggt
ggaaaagaaaaggataaccccgcatctcacctccacttttcaataaagcatccacataca
ctgtcttgggaatactacactatgtttcagtgtaaagctcacctcgtgatgagactgatt
gaaaacagaatcagcatggaatttatgctgcaagttttcaataaactattaagtctggcc
agtaccgcttcatcccagaagttccagtcacatatgtggagccagatgctggtctccacc
tacgggtttttgaagtccatttccaatgtctctggcaaagacatccagcccttaataaag
cagtgggtagaccagagtggagtggtaaagttttatggaagttttgcatttaatagaaaa
cgaaatgttttagaactagaaataaaacaagattacacatctcctggcacccagaagtac
gtgggaccacttaaagtgacagtgcaagagttagacggctccttcaaccataccttgcaa
attgaagaaaacagccttaaacatgacataccctgccactccaaaagcagaaggaataag
aagaagaaaatcccactgatgaatggggaagaagtcgatatggatctttctgcaatggat
gcggactcccctttgctgtggataaggatagacccagatatgtctgtcctgaggaaggtg
gagtttgagcaggctgactttatgtggcagtatgagctccgctatgagagagatgttgtt
gctcagcaggaatccatcttggccttggaaaagttccccacgcccgcatcgcgcctcgcg
ctcactgatatactagagcaagagcagtgtttctaccgagtgaggatgtcagcatgcttc
tgccttgcaaagattgcaaactcaatggtgagcacatggacgggaccaccagccatgaag
tccctctttactagaatgttttgttgtaaaacttgtcccaacatcgtgaaaacaaacaac
ttcatgagctttcagagttattttctacagaagactatgccagttgcaatggctttgtta
agagacgtacataatctttgtcccaaagaagttttaacatttattttagacttaatcaag
tacaatgacaacagaaaaaataagttttcagataactattaccgtgcagaaatgattgat
gccttggctaactctgtcacacctgctgtcagcgtgaataatgaagtcagaactttggat
aacttaaatcctgatgtgcgactaatacttgaagaaattacccggtttttgaatatggaa
aaacttctcccaagttacagacatactatcactgtcagttgtttgagagccataagagtg
cttcagaagaatggacatgtgccaagtgatgcatctcttttcaaatcctatgctgagtat
ggccacttcgtggacatcaggatagcggctctggaagccgtcgtcgattacaccaaagtg
gacaggagttatgaagaacttcaatggctacttaatatgattcagactgaccctgtcccc
tatgtgaggcataagattctaaacatgctgactaaaaatccgccatttacaaagaacatg
gagtctcctttatgcaacgaggccttggtagatcagctctggaagctgatgaattctggt
actgcacatgactggaggttacggtgtggagctgtggacttgtacttcacgctctttggc
ctcagtagaccttcttgtttacccttgccagagctcgggcttgttcttaacctaaaagag
aagaaagctgtcttgaatccaaccataattccagaagcgggagtaggcaatcaggaaact
gcaagtaacccaggctgtcacactcagctagcaggatttcagaaccctttctcaagttct
caggatgaggaggaggtcgatatggacaccgttcatgatagtcaggccttcatttcccat
catctgaacatgcttgaaaggccgtccactccagggctctctaagtaccgaccatccagc
tccaggtcttccttaatgccccagcatgcattaggctgtgacatcacaccaaccacaaaa
ccccagtggagtatggaactgtcccgaaagggagcaggtaaagagcagcctttggagatg
ggtgtgcatcccgtggcggccccgctctccgtgtttgctaaggaggctctgtcctctgcc
cggcacagcgagcaccaccaccaccatcaccatgagcacaagaagaagaagaagaagcac
aaacacaagcacaagcacaagcacaagcatgacggcaaggacaaggacaaggacaaggag
cccttcaccttctccagccctgccagtggcaggtctgtgcgctccccttcactctcagac
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system