KEGG   Rattus norvegicus (rat): 170905
Entry
170905            CDS       T01003                                 
Symbol
Lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe precursor
  KO
K05948  fringe [EC:2.4.1.222]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00514  Other types of O-glycan biosynthesis
rno04330  Notch signaling pathway
rno05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00514 Other types of O-glycan biosynthesis
    170905 (Lfng)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    170905 (Lfng)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    170905 (Lfng)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rno01003]
    170905 (Lfng)
Enzymes [BR:rno01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.222  O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
     170905 (Lfng)
Glycosyltransferases [BR:rno01003]
 Glycan extension
  O-Glycan
   170905 (Lfng)
SSDB
Motif
Pfam: Fringe Galactosyl_T
Other DBs
NCBI-GeneID: 170905
NCBI-ProteinID: NP_596884
RGD: 620587
Ensembl: ENSRNOG00000001250
UniProt: Q924T4 A6K1R9
Position
12:complement(19144474..19152951)
AA seq 378 aa
MLQRCGRRLLLALVGALLACLLVLTADPPPTPVPAERGRRALRSLAGSSGAAPGPGSRAA
VDPGVLVREVHSLSEYFSLLTRARRDADPPPGVASRQGDGHPRPPAEVLSPRDVFIAVKT
TRKFHRARLDLLFETWISRHKEMTFIFTDGEDEALAKHTGNVVLTNCSAAHSRQALSCKM
AVEYDRFIESGKKWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATERIS
EHRVRPVHFWFATGGAGFCISRGLALKMGPWASGGHFMSTAERIRLPDDCTIGYIVEALL
GVPLIRSGLFHSHLENLQQVPTTELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRS
IHCHLYPDTPWCPRTAIL
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgctccagcgctgcggccggcgcctactgctggcgctggtgggtgcgctgctggcttgt
ctcctggtgctcaccgccgacccgccgccaactccggtgcccgctgagcgcggaaggcgc
gcgctgcgtagcctggcgggctcctctggggcggctccgggtccagggtccagggcggcc
gtggatcccggagtcctcgtccgcgaggtgcacagcctttccgagtacttcagtctactc
acccgcgcgcgcagagacgccgatccaccgcccggggtcgcttctcgccagggcgacggc
catccgcgtccccccgccgaggttctgtcccctcgcgatgtcttcatcgccgtcaagacc
accagaaagtttcaccgcgcgcggcttgacctgctgttcgagacctggatctcgcgccac
aaggagatgacattcatcttcacggacggggaggatgaagctttggccaagcacacaggc
aatgtggtactcaccaactgctctgcggcccacagccgccaggcgctgtcttgcaagatg
gctgtggagtacgaccgtttcattgagtcggggaagaagtggttctgccacgtggacgat
gacaactacgtcaacctccgggcactgctgcggctgctggccagctatccccacacccaa
gacgtgtacatcggcaagcccagcctggacagacccatccaggccacggagcggatcagc
gagcacagagtgagacctgtccacttttggtttgccaccggaggagctggcttctgcatt
agccgaggactggccctaaagatgggcccatgggccagtgggggacacttcatgagcaca
gcagagcgcatccgcctcccggatgattgcaccattggctacattgtggaggctctgctg
ggcgtgcccctcatccggagtggcctcttccactcgcacctggagaacctgcagcaggtg
cccaccaccgagctccatgaacaggtgaccctgagctatggcatgtttgaaaacaagcgg
aacgccgtgcacatcaagggacccttctcagtggaggctgacccttccaggttccgctct
atccactgccatctgtacccggacacaccctggtgtccccgcactgccatcctctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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