KEGG   Rattus norvegicus (rat): 170912
Entry
170912            CDS       T01003                                 
Symbol
A1cf
Name
(RefSeq) APOBEC1 complementation factor
  KO
K24978  APOBEC1 complementation factor
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    170912 (A1cf)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    APOBEC1-ACF complex
     170912 (A1cf)
SSDB
Motif
Pfam: RRM_1 DND1_DSRM RRM_7 RRM_5 BRAP2 dsrm
Other DBs
NCBI-GeneID: 170912
NCBI-ProteinID: NP_596891
RGD: 619834
Ensembl: ENSRNOG00000033195
UniProt: Q923K9
Position
1:239149436..239242460
AA seq 586 aa
MESNHKSGDGLSGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDTTPPERGCEIFI
GKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKQEAKNAIKQLNNYE
IRNGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRG
FAFVEYESHRAAAMARRRLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLML
STSEEMIEKEFNSIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTL
AKPVDKDSYVRYTRGTGGRNTMLQEYTYPLSHVYDPTTTYLGAPVFYTPQAYAAIPSLHF
PATKGHLSNRALIRTPSVRGAAGVRGLGGRGYLAYTGLGRGYQVKGDKRQDKLYDLLPGM
ELTPMNTISLKPQGVKLAPQILEEICQKNNWGQPVYQLHSAIGQDQRQLFLYKVTIPALA
SQNPAIHPFTPPKLSAYVDEAKRYAAEHTLQTLGIPTEGGDAGTTAPTATSATVFPGYAV
PSATAPVSTAQLKQAVTLGQDLAAYTTYEVYPTFAVTTRGDGYGTF
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggaatcaaatcacaaatccggggatggattgagcggcacccagaaggaagcagcactc
cgcgcactggtccagcgcacaggatatagcttggtccaggaaaatggacaaagaaaatat
ggtggtcctccaccaggctgggatactacacccccagaaaggggctgcgagattttcatt
gggaaacttccccgggacctttttgaggatgaactcataccattgtgtgaaaaaattggt
aaaatttatgaaatgagaatgatgatggatttcaatgggaacaacagaggctatgcattt
gtaaccttctcaaataagcaggaagccaagaatgcaatcaagcaacttaataattatgaa
attcggaatggccgtctcctgggcgtctgtgccagtgtggacaactgccggttgtttgtg
gggggaatccccaaaaccaaaaagagagaagaaatcttgtcagagatgaaaaaggtcact
gaaggagttgttgatgtcattgtctacccaagcgctgccgataaaaccaaaaaccggggg
tttgcctttgtggaatatgagagtcaccgcgcagccgccatggctaggcggaggctgctg
ccaggaagaattcagttgtggggacatcctatcgcagtagactgggcagagccagaagtc
gaagttgacgaagacacaatgtcttccgtgaaaatcctgtacgtaaggaaccttatgctg
tctacctcggaagagatgattgagaaggaattcaacagtattaaaccaggtgctgtggaa
cgggtgaagaagatccgagactatgcttttgtgcatttcagtaaccgagaagatgcagtt
gaagccatgaaggctttgaatggcaaggtgctggatggttccccaatagaagtgaccttg
gccaagccagtggacaaggacagttacgttaggtacacccggggcaccgggggcaggaac
accatgctgcaagaatacacctaccctctgagccatgtttatgaccctaccacaacctac
cttggagctcctgtcttctatactccccaagcctacgcagccattccaagtcttcatttc
ccagctaccaaaggacatctcagcaacagagctctcatccggaccccttctgtcagaggg
gctgcgggcgtgagaggactgggcggccgtgggtatttggcatatacaggcctgggtcga
ggataccaggtcaaaggagacaagagacaagacaaactctatgaccttctgcctgggatg
gagctcaccccgatgaatactatctctttaaaaccacaaggagttaaacttgctcctcag
atattagaagaaatctgtcagaaaaataactggggacagccagtgtaccagctgcactct
gccattggacaagaccaaagacagttattcctatacaaagtaactatcccagcgctggcc
agccagaatcctgcgatccaccctttcacacccccaaagctaagcgcctacgtggatgaa
gcaaagaggtacgccgcagagcacaccctacagacactaggcatccccacagaaggaggg
gacgctgggactacagcacccactgccacatccgccactgtgtttccaggatacgctgtc
cccagtgccaccgctcctgtgtctacagcccagctcaagcaagcagtgacacttggacaa
gacttagcagcatatacaacctatgaggtctaccctacttttgcagtgaccacccgaggt
gatggatatggcaccttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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