KEGG   Rattus norvegicus (rat): 170933
Entry
170933            CDS       T01003                                 
Symbol
Syf2
Name
(RefSeq) pre-mRNA-splicing factor SYF2
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    170933 (Syf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    170933 (Syf2)
Spliceosome [BR:rno03041]
 Complex B
  Other components
   Prp19-related factors
    170933 (Syf2)
 Complex C
    170933 (Syf2)
SSDB
Motif
Pfam: SYF2
Other DBs
NCBI-GeneID: 170933
NCBI-ProteinID: NP_596908
RGD: 621592
Ensembl: ENSRNOG00000060597
UniProt: Q4QRB2
Position
5:152440171..152448094
AA seq 242 aa
MAAVTEVVVPADGAEARPLAAEELAAQKREQRLRKFRELHLKRNEARKLNHQEVVEEDKR
LKLPANWEAKKARLEWELQEEEKKKECAARGEDYEKVKLLEISAEDAERWERRKKKKNPD
LGFSDYAAAQLRQYHRLTKQIKPDMESYERQREKHGEDFFPTSNSLLHGTHVPSSEEIDR
MVLDLEKQIEKRDKYSRRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGT
AV
NT seq 729 nt   +upstreamnt  +downstreamnt
atggcggctgtgactgaagttgtggtacccgcggacggcgcggaagccaggcccttggcg
gccgaggagctggcggcgcagaagcgagagcagagactgcgcaagttccgtgagctgcat
ctgaagcggaatgaagctcgtaagttaaatcaccaggaagttgtggaagaagacaaaaga
cttaagctgcctgctaactgggaagccaagaaagcacgtctggagtgggaactccaggaa
gaagaaaagaagaaggagtgtgcagctcgaggggaagactacgagaaggtgaaactgctg
gagatcagtgcggaggacgctgagaggtgggagaggaggaagaagaagaagaaccctgac
ttggggttttcagattatgctgctgcccaattgcgccagtatcaccggctgaccaagcag
atcaaacctgacatggaaagctacgagcgacagagagaaaagcatggagaagattttttc
ccgacatccaacagtcttctccatgggacgcatgtgccttcctcagaggaaattgacaga
atggttttagatctggaaaagcaaattgaaaagagagacaaatacagccgaagacgtcct
tacaatgacgatgccgacatcgactacattaatgagaggaacgccaagttcaacaagaaa
gcagagaggttctacgggaagtacacggctgagatcaagcagaacctggagagaggaaca
gctgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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