KEGG   Rattus norvegicus (rat): 171039
Entry
171039            CDS       T01003                                 
Symbol
Rph3a
Name
(RefSeq) rabphilin-3A
  KO
K19938  rabphilin-3A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    171039 (Rph3a)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    171039 (Rph3a)
SSDB
Motif
Pfam: C2 FYVE_2 PI3K_C2 FYVE_CARP1-2 OmpH SocA_Panacea C1_1 zf-piccolo
Other DBs
NCBI-GeneID: 171039
NCBI-ProteinID: NP_598202
RGD: 620073
Ensembl: ENSRNOG00000001368
UniProt: P47709
Structure
Position
12:41203004..41279536
AA seq 684 aa
MTDTVVNRWMYPGDGPLQSNDKEQLQAGWSVHPGAQTDRQRKQEELTDEEKEIINRVIAR
AEKMEAMEQERIGRLVDRLETMRKNVAGDGVNRCILCGEQLGMLGSACVVCEDCKKNVCT
KCGVETSNNRPHPVWLCKICLEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPAGE
PATQEQPTPESRHPARAPARGDMEDRRAPGQKPGPDLTSAPGRGSHGPPTRRASEARMST
TTRDSEGWDHGHGGGAGDTSRSPGGEQGLRRANSVQASRPAPASMPSPAPPQPVQPGPPG
GSRAAPGPGRFPEQSTEAPPSDPGYPGAVAPAREERTGPTGGFQAAPHTAGPYSQAAPAR
QPPPAEEEEEEANSYDSDEATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADP
YVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGH
NEFIGETRFSLKKLKANQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEE
RGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKK
KTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYE
CLKNKDKKIERWHQLQNENHVSSD
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgactgacactgtggtgaaccgttggatgtaccctggtgatggcccactgcagtcaaat
gacaaggaacagctgcaggcaggatggtccgtccatcctggagcacagacggacaggcag
aggaagcaggaagaactgacagacgaggagaaggagataatcaaccgggtgatagctcgg
gcagagaagatggaagccatggagcaggagcgcatcgggcgcctggtggaccgtctggag
accatgaggaagaatgtagctggagatggtgtgaaccgttgcatcctgtgcggggaacag
ctgggcatgctgggctctgcgtgtgtcgtgtgtgaagactgtaagaagaatgtctgcacc
aagtgtggggtggagacctccaacaaccgtccgcatccagtatggctctgtaagatctgc
cttgagcagagagaggtctggaagcgctcgggagcatggttcttcaagggtttcccaaaa
caggtccttccacagcccatgcctataaagaagaccaagccccagcagcctgctggtgag
ccggccacccaggagcagcctacacccgagtccaggcatccagccagagctccagctcga
ggtgacatggaggacaggagggccccaggacagaagccaggccctgacctcacctctgct
cctggacgaggaagccatgggcctcccacacgcagggcctctgaggcccggatgagtaca
accacccgtgattctgagggctgggaccatggtcatggtgggggtgctggagacaccagc
cggagcccaggaggtgagcaaggtttgaggcgagctaactcagtccaggcctcccgccca
gctccagcctccatgccaagcccggcacctcctcagcccgtgcagccagggccccctggg
ggcagcagggccgctcctgggccgggacgctttccagagcagagcacagaggctcctcca
agtgaccctggctatccaggggctgttgccccagcccgggaggagaggacaggacccaca
gggggcttccaggcagcgccccacactgcgggtccctattcccaggcggcccctgcccgc
cagccaccgcctgctgaggaagaggaggaagaagccaacagctatgactcagatgaagca
accacactgggtgccctggaattcagccttctctatgaccaagacaacagcaacctgcag
tgcaccatcatcagggcgaagggactgaagcccatggactccaacggcttagcggatccc
tatgtgaagctgcatctgctgcctggagccagcaagtccaacaagcttcgtacaaagacc
ctgcgcaacacccggaaccctgtgtggaacgagacgctgcagtatcatggcattactgag
gaggacatgcagaggaagacactcaggatctccgtatgtgacgaggacaagtttggccac
aatgagttcattggtgagaccaggttctcgctcaagaaactgaaggcgaaccagaggaaa
aacttcaacatctgcctggagcgggtgatcccgatgaagcgcgcaggaaccactgggtca
gcacgtggcatggctctctatgaggaggagcaggtggagcggatcggagacatagaggaa
cggggcaagatcctggtgtccctcatgtacagcacgcagcagggcggcctcatcgtggga
attatccgctgtgtgcacctggctgccatggacgccaacggctactcagaccccttcgtc
aagctctggctgaaaccggacatggggaagaaagccaagcacaagactcagattaaaaag
aagaccctgaatcccgagtttaatgaggagttcttttatgatatcaaacacagcgacctg
gccaaaaagtccctggatatctcagtgtgggactacgacattggcaaatcgaatgattac
atcggaggctgccagctggggatctcggccaagggcgagcgcttgaaacattggtatgag
tgtctgaagaacaaagacaagaagattgaacgttggcaccaactgcagaacgagaaccac
gtgtcgagcgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
3D Structure (11)   
   PDB (11)   
Protein domain (8)   
   Pfam (8)   
All databases (44)   

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