KEGG   Rattus norvegicus (rat): 171046
Entry
171046            CDS       T01003                                 
Symbol
Tcf3
Name
(RefSeq) transcription factor E2-alpha isoform a
  KO
K09063  transcription factor E2-alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04550  Signaling pathways regulating pluripotency of stem cells
rno05166  Human T-cell leukemia virus 1 infection
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    171046 (Tcf3)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    171046 (Tcf3)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    171046 (Tcf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    171046 (Tcf3)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    171046 (Tcf3)
SSDB
Motif
Pfam: HLH
Other DBs
NCBI-GeneID: 171046
NCBI-ProteinID: NP_598208
RGD: 620914
Ensembl: ENSRNOG00000051499
UniProt: P21677 Q68G29
Position
7:9931251..9952994
AA seq 649 aa
MMNQSQRMAPVGSDKELSDLLDFSMMFPLPVANGKGRPASLAGTQFAGSGLEDRPSSGSW
GNSEQNSSSFDPSRAYSEGAHFSDSHSSLPPSTFLGAGLGGKGSERNAYATFGRDTSVGT
LSQAGFLPGELGLSSPGPLSPSGVKSSSQYYTSFPSNPRRRAADGGLDTQPKKVRKVPPG
LPSSVYPSSSGDNYSRDATAYPSAKTPSSAYPSPFYVADGSLHPSAELWSPPGQVGFGPM
LGDGSAPLPLAPGSSSVSSGAFGGLQQQDRMGYQLHGSEVNGTLPAVSSFSAAPGTYSGT
SGHTPPVSGADSLLGTRGTTASSSGDALGKALASIYSPDHSSNNFSPSPSTPVGSPQGLP
GTSQWPRAGAPSALSPNYDAGLHGLSKMEDRLDEAIHVLRSHAVGTASELHGLLPGHSTL
TTSFAGPMSLGGRHAGLVSGSHPEDGLTSGASLLHNHASLPSQPSSLPDLSQRPPDSFSG
LGRAGVTAGASEIKREEKEDEEVTSVADAEEDKKDLKVPRTRTSPDEDEDDLLPPEQKAE
REKERRVANNARERLRVRDINEAFKELGRMCQLHLSTEKPQTKLLILHQAVAVILSLEQQ
VRERNLNPKAACLKRREEEKVSGVVGDPQLALSAAHPGLGEAHNPAGHL
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgatgaaccagtctcagagaatggcacctgttggctcggacaaagaactgagtgacctc
ctggacttcagtatgatgttcccgctacctgtggccaatggcaagggccggcccgcctcc
ctagctggaacccagttcgcaggctcaggactggaggaccgacccagctcagggtcctgg
ggcaacagtgaacagaacagttcttcctttgaccctagccgggcatacagcgaaggtgcc
cacttcagtgactcccacagcagcctgccgccttccacgttcctaggagctgggcttgga
ggcaagggcagtgaacggaatgcctatgccaccttcgggagagacaccagtgttggcacc
ctgagtcaggctggcttcctaccaggtgagctgggcctcagcagtcccgggccactgtcc
ccatcaggcgtcaagagcagctcccagtattacacctcattccccagcaaccctcggcgg
agagctgcagatggtggcctggatactcagcccaagaaggtccggaaggttccgcctggt
cttccttcctcggtatatccatccagctcaggtgataactacagcagggacgccacagcc
tacccctccgccaagacccccagcagcgcttacccctcccccttctacgtggcagacggc
agcctgcacccctcagcggagctctggagtccccctggccaggtgggctttgggcccatg
ctaggtgatggctcggcccccctgccgcttgcaccgggcagcagttccgtgagcagtggt
gcctttgggggcctccagcagcaggatcgcatgggctaccagctgcatgggtctgaggtc
aatggcacgctcccagctgtatccagcttctcagctgcccctggcacttacagtgggact
tctggccacacgccacccgtgagcggggccgacagcctcttaggcacccgagggactaca
gccagcagctcaggggatgcccttgggaaggcactggcctccatctactccccggatcac
tccagcaataatttctcgcccagcccctcaacgcctgtgggttcaccccagggcctgcca
gggacatcacagtggccccgggcaggagcgcccagtgccttatcccccaactacgatgca
ggtctccatggcctgagtaaaatggaagatcgcttggacgaggccatccacgtcctccgc
agtcacgctgtcggcactgcaagcgagctccatggactgctgcctggccacagcacgttg
accacaagctttgcgggccccatgtcactgggcgggcggcatgcaggcctggtcagcgga
agccaccctgaggatggcctcacaagtggtgccagtcttttgcataaccatgccagcctt
cccagccagcccagctccctccctgacctctcacagaggccacccgactcctttagtgga
ctcgggagggcaggcgtgactgcaggcgccagtgagatcaagcgggaggagaaagaggac
gaggaggtcacatcagtggcagacgctgaggaagacaagaaggacctgaaggtcccacgc
acacgtaccagcccagacgaggacgaggacgaccttctccccccagagcagaaggccgag
cgggagaaggagcgccgggtggccaataacgcccgagagcgcctgcgtgtccgcgacatc
aatgaggcctttaaggagctcggccgcatgtgccagctgcacctcagcactgagaagccg
cagaccaaactgctcatcctgcaccaggccgtggccgtcatcctcagcctggagcagcag
gtgcgagaacgcaacctgaaccccaaagcagcctgcttgaagcggcgggaggaggagaag
gtatctggcgtggtcggggatccgcagctggcgctgtcagccgcccacccgggcctgggt
gaggcccacaatccagctgggcacctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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