KEGG   Rattus norvegicus (rat): 171063
Entry
171063            CDS       T01003                                 
Symbol
Gtf3c1
Name
(RefSeq) general transcription factor 3C polypeptide 1
  KO
K15199  general transcription factor 3C polypeptide 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    171063 (Gtf3c1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     171063 (Gtf3c1)
SSDB
Motif
Pfam: B-block_TFIIIC
Other DBs
NCBI-GeneID: 171063
NCBI-ProteinID: NP_598225
RGD: 621048
Ensembl: ENSRNOG00000016218
UniProt: F1LNV7 A6I922
Position
1:complement(189634645..189700848)
AA seq 2102 aa
MDALESLLDEVALEGLDGLCLPALWSRLESRSPAFPLPLEPYTQEFLWRALVTHPGISFY
EEPRERPDLQLQDRYEEIDLETGILESRRDPVTLEDVYPIHMILENKDGIQGSCRYFKER
KDITSSIRSKCLQPRCTMVEAFSRWGKKLIIVASQDMRYRALIGLEGDPDLKLPDFSYCI
LERLGRSRWQGELQRDLHTTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSI
LLLLNRFHVDRRSKYDILMEKLSMMLSTRSNQIETLGKLREELGLCERTFKRLYQYMLNA
GLAKVVSLPLQEIHPECGPCKTKKGTDVMVRCLKLLKEFRRKMEDDHDDDDDEEAISKAV
PPVDIVFERDMLTQTYELIERRGTKGISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFM
EDEGRQRTTKYISCVFAEESDLSRQYAREKARGELLTTVSLASVQDESLMPEGEEAFLSD
SESEEESSCSGKRRGRGSRGHSRASGDAGPGSRPHHSTPAKGGWKVLNLHPLKKPKSAAV
ERSRRSSACRDGLDTSSSSELNIPFDPHSMDSHSGDIAVIEEVRLDNPKEGGGSQKGGRH
GSGQDKPHKTYRLLKRRNLIIEAVTNLRLIESLFTIQKMIMDQEKQEGVSTKCCKKSIIR
LVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQNDPLVRSAIEQVRFRISNSSTAN
RVKVPPAPAPQEEAEEGNQEPEVPSRSADSEANTSSKPESTRVKKTDEKMGITPLKNYKP
VIVPGLGRSIGFLPKMPRLRVMHLFLWYLVYGHPASHTGEQPTFHSERKTGKQEPSRPGV
QPSSGDDWDSSEAKNSTESSSWEAEMELSTERVYVDEISWMRYVPPIPIHRDFGFGWALV
SDILLCLPLSIFVQVVQVSYKVDNLEDFLNDPLKKHTLIRFLPRHIRQQLLYKRRYIFSV
VENLQRLCYMGLLQFGPTEKFQDKDQVFVFLKKNAVIVDTTICDPHYNLAHSSRPFERRL
YVLDSMQDVESYWFDLQCICLNTPLGVVRCPCAQKICPDPGSDPEGSLRKEQESAMDKHN
LERKCAMLEYTTGSREVVDEGLVPGDGLGAAGLDSSFYAHLKRNWVWTSYIINKARKNNT
SENGLTGRLQTFLSKRPMPLGSGGSGRLPLWSEGKADAELCADKEEHFELDREPTPGRNR
KVRGGKSQKRKRLKKEPIRKTKRRRRGEHPEAKSKKLRYQDEADQNALRMMTRLRVSWSM
QEDGLLMLCRIASNVLNTKVKGPFVTWQVVRDILHATFEESLDKTSHSVGRRARYIVKNP
QAFMNYKVCLAEVYQDKALVGDFMSRKDNYEDPKVCAKEFKEFVEKLKEKFSSGLRNPNL
EIPDTLQELFAKYRVLAIGDEKDRVRKEDELNSVEDIHFLVLQNLIQSTLSLSNSQSNSC
QSFQIFRLYREFREPVLVRAFMECQKRSLVNRRRVSHSQGPKKNRAVPFVPMSYQLSQSY
YKLFTWRFPTTVCTESFQFYDRLRANGILDQPDHFSFKDMDSNDPSSDLVAFSLDSPGGH
CVTALALFSLGLLSVDVRIPEQIVVVDSSMVESEVMKSLGKDGGLDDDDEEEDLDEGSGT
KRQSVEVKAHQASHTKYLLMRGYYTVPGMVSTRNLNPNDSIVVNSCQVKFRLRNTPAPTH
LGPTGPTATPLEELQAGPSCLPASFTSLVDPQLHTRCPEEFAHQMAQSGYSPEDVAASLE
ILQAVAAADCFGVDREKLSRQFSALEKIADKRTRTFLDYIQDLLEQQQVMEVGGNTVRLV
AMASAQPWLLPSVRLKDVEIDTKASGDDSQSRLPAGSSIEDHTSEGAPIPPVSSNGTKKR
PYCSIQSPETDAEEATRLPAKKPTLQDVCVAASPRPGTEEQTEAQAQFAAPEDAGAEGPR
QESQESVGVSGLEQLGCEFQLPENSEDPRGLTESNMAQVAWESGCERVCFVGRPWRGVDG
RLNMPVCKGMMEAVLYHIMSRPGVPESCLLQYYQGVLQPVAVLELLRGLESLGCIQKRML
KKPASVSLFSRPVVEGLGQASEAEALSCQGSTVTFYEPTLDCTIRLGRVFPHDINWNKWI
HL
NT seq 6309 nt   +upstreamnt  +downstreamnt
atggacgcgctcgagtcgttgttggacgaggtggccctggaggggctcgacggcctgtgc
ctgcccgcgctgtggagccgcctggaatcccgctcgcctgccttccctttgccgctggaa
ccctacacgcaggagtttctgtggcgggccttagtcacgcacccgggcatcagtttctac
gaggagccgcgagagcgacctgacctgcagctccaagaccgatatgaagaaatcgacttg
gaaactggaattttggagtccaggagggacccagtcactctggaagatgtctaccccatt
catatgatcttagagaataaggatggcatccagggctcctgccgatactttaaggagaga
aaggacatcaccagtagcatcaggagcaagtgtttgcagcctcgttgtacaatggtagaa
gccttcagcaggtggggtaagaagctcatcattgtggcttcccaggacatgcgataccgg
gccttgataggcctagagggggatcctgatctgaagcttcctgatttctcctactgcatt
ttggagcggttaggtcgatcgagatggcaaggggagctgcaacgagaccttcacaccacc
gctttcaaggtcgacgctgggaagcttcattatcacaggaaaattttgaacaagaatggg
ctcattacaatgcagtcacacgtgatccgactgcctactggagcccagcaacactccatc
ctcctcctccttaaccggtttcatgtagacaggaggagcaagtacgacatcctcatggag
aagctgtctatgatgctgagcacacggagcaaccagatcgagactctgggcaagctgagg
gaggagctgggactgtgtgaaaggacgttcaagcgtctgtaccagtacatgctgaatgct
gggctggccaaagtggtgtcccttcccttgcaggagattcaccctgagtgtggtccctgt
aagaccaagaaagggactgatgtcatggttcggtgccttaagctcctgaaggagttcagg
cgaaagatggaagacgaccatgacgacgatgacgatgaagaggccatctccaaggctgta
cctcccgtggacatcgtgtttgagcgggacatgctcacgcagacctacgagctcattgag
cgcagaggaacgaaaggaatttcccaagctgagatccgagttgctatgaatgtgggaaaa
ctggaagcaagaatgctgtgtcggctccttcagaggttcaaggttgtcaagggattcatg
gaagatgaaggccggcagaggaccaccaagtacatttcctgtgtatttgcggaggagagt
gacttgagccgccaatatgcgcgtgaaaaggcccgaggagagctgctaaccactgtgagc
ctcgcctcagtgcaagatgaatccctcatgcctgagggtgaagaggccttcctctctgac
tccgaaagtgaggaagagagcagctgcagtggcaagcgtaggggccgagggtcccggggg
cattcaagagcctctggggatgctgggcctggctctcggcctcatcactccactccagcc
aagggcgggtggaaagtcctaaatctgcacccattaaagaagcccaaaagtgccgctgtg
gaaagatcccgccgaagctctgcttgtagggatggcctggacaccagcagctcatccgag
ctcaatataccctttgaccctcacagcatggacagtcacagtggtgacatcgctgtgatt
gaggaggtccggcttgataaccccaaggagggtggtggctcccagaagggcggacggcat
ggctcaggccaggacaagcctcacaaaacataccgactgctaaagcgcagaaatctgatt
atagaagctgtcaccaacctccgcctgattgagagcctgttcacgattcagaagatgatc
atggaccaggagaagcaagagggtgtctccaccaaatgctgtaagaagtccattatccgc
ttggtgcggaacctgtctgaggagggtctcttgagattgtataggactacagtcattcaa
gatggcatcaagaagaaggtagacctggtcgtgcacccttccatggaccagaatgaccct
cttgtgagaagtgctattgagcaggttcgcttccggatctccaactcaagcacagcaaac
agggttaaagttccaccggccccagcaccccaagaggaagcagaagagggaaaccaagaa
ccagaggtcccaagtagatcagcagactctgaagcgaacacatcctcgaagccagaaagc
acacgggtgaaaaagacagatgagaaaatgggcataaccccactcaagaattacaaacct
gtcatagttcctggacttgggcgctccatagggttccttcccaagatgccacgccttcgg
gtgatgcacctgttcctgtggtacctggtgtatgggcatcctgccagccacactggggaa
cagcctactttccacagtgagaggaaaacaggcaagcaggagcccagcagaccaggggtc
cagccctcctcaggagatgactgggactcctctgaagccaaaaacagcacagaaagcagc
tcctgggaggcagaaatggaactctccacagagagagtgtatgtggatgagatctcatgg
atgcgctacgtccctcccatccccatccacagagacttcggctttggctgggctcttgtc
agtgacattcttctctgccttcccctctccatctttgtccaagttgttcaagtcagctac
aaggtggataacctggaggattttctgaatgaccctctgaagaagcacacactgatccgc
ttcctccctaggcacatccggcagcagctactgtataagaggcggtatattttctcggtg
gtggagaacctgcaacggctgtgctacatggggctgctacagtttggacccacagagaag
tttcaggataaagaccaggtctttgttttcctgaagaagaatgcagtcattgtggacacc
accatctgtgacccacattacaacctggcccacagcagccggccttttgagagacgtctc
tacgtcttggattccatgcaggatgtggaaagctactggtttgacctgcagtgtatctgc
ctaaacaccccactaggtgtggtgcgttgtccatgtgcacagaagatctgccctgatccg
ggcagtgacccagaaggcagcttgcggaaggagcaagagagcgccatggacaagcacaac
ctagagcgcaagtgtgccatgctggagtataccacggggagccgagaagttgtggatgaa
ggcttagtccctggggatggactgggagctgctgggctggactctagcttctatgcacac
ctgaagcgcaactgggtctggaccagctatatcatcaacaaagccagaaagaacaacacc
tccgaaaatgggctcacaggaagactccagactttcctgtctaagcgcccaatgccactt
gggtctggaggcagtggccgtctgcctctctggtcagaggggaaagctgatgctgagctc
tgtgctgacaaagaggaacactttgaactggaccgagaacctacccctggcaggaaccga
aaagtgcgtgggggcaagagtcagaagcggaagcggctgaagaaggagcccatcaggaag
accaagcgaaggagaagaggagagcatccagaagccaaaagcaaaaaactacgctaccaa
gatgaggctgaccagaacgccctccggatgatgacccggcttcgggtttcttggtccatg
caggaggatgggttactaatgctctgccgaattgccagcaatgtcctcaacaccaaggtg
aaaggaccatttgtcacctggcaggtcgtgcgtgacattttgcatgctacctttgaagag
tctttggataaaacatctcactcggttggacgaagagctcgctacatagtcaaaaatccc
caggcctttatgaactacaaagtctgcctggcagaagtgtaccaagataaggcactcgtt
ggagatttcatgagtcggaaggataactacgaagacccaaaggtctgtgccaaggagttt
aaagaatttgtggagaagctgaaagagaagttcagctctggcctgaggaaccccaacctt
gagatcccagacacactgcaggaactctttgccaaataccgggtgttggcaatcggagat
gaaaaggaccgtgtcaggaaggaggatgaactgaatagtgtggaggacatccacttcctg
gtgctacagaacctgatccagagcacactgtccctctctaacagccagtccaactcttgc
cagtccttccagatcttccgcctctaccgggagttccgggagcctgtgctggtgcgggcc
ttcatggagtgccaaaagaggagcctggtcaaccgacgccgtgtcagccactcccagggt
cccaagaagaaccgtgctgtgccctttgtgcccatgtcctaccagctctcccagtcatac
tacaagcttttcacctggcgatttcccaccaccgtctgcaccgaatccttccagttctat
gacagactacgggccaacggcatactagaccagcctgatcatttttctttcaaggacatg
gatagcaatgacccttcaagtgacctggtggcgttttctttggacagccctggaggacac
tgtgtgacagccctggccctcttctccttgggcctcctctctgtggatgtccgaatccca
gagcagattgtggtggtagacagctccatggtggagagtgaggtcatgaagagcttgggg
aaagatggcggcttggatgatgatgatgaggaggaagacctggatgaaggttcagggacc
aagcgtcagagtgtggaagtaaaggcccatcaggcctcacacaccaagtacctgctgatg
agaggttactacacagtgcctggcatggtcagcacgcgcaacctgaaccccaatgacagc
attgtggtcaattcctgccaggttaaattccgactgcgcaatacccctgcacccacccat
cttgggcccactgggcccacagccacaccgctagaagagctccaggctggcccttcctgc
ctccctgcctcctttaccagcctggtggatccacagctgcacacccgctgcccagaagag
tttgcccaccagatggcacagtctgggtacagccctgaggacgtggctgcgtccctagag
atcctgcaggctgtggcagctgctgactgcttcggggttgacagggagaagctgagcaga
cagttctctgccttggagaagatagcggacaagcgcaccaggacgttcctggactatatc
caggacctcttggaacagcaacaagtcatggaagttggaggcaacactgtgcgcctagtg
gccatggcctctgcccagccctggctcctgccttcagtgcgtctgaaagatgtggaaata
gacaccaaggcctcaggggatgacagccaatctagactccctgcggggtcttccatcgaa
gaccacacctctgagggtgcaccaattcctccagtcagctccaatggcactaaaaagcgc
ccctactgctctattcagagccctgaaactgatgctgaggaagctacaaggctccctgcc
aagaagcccacattacaagatgtctgtgtggctgccagtcctaggcctggaacagaagag
cagacagaggcccaggctcagtttgcagctcctgaagatgcaggtgcagagggccccagg
caggagagccaagagagtgttggtgtctcaggcctagagcagctgggctgtgagttccag
cttccagaaaattctgaagaccccagaggacttacagagagcaacatggcccaggtagca
tgggagagcggctgtgaaagagtatgttttgtcggtcgcccatggcgtggtgtggacggg
cgcctgaacatgcccgtgtgcaaaggcatgatggaagccgtgctgtaccacatcatgtca
aggcccggtgttcctgagagctgcctgctacagtactaccagggcgtcctacagcctgtt
gctgtgcttgagctgctccggggcttagagtctctcggctgtatccagaagcggatgctg
aagaagccagcgagtgtctcactcttctccaggcctgtggtggagggcctaggtcaggcc
agtgaggccgaggcactctcctgtcaggggagcactgtcaccttttatgaacctactctg
gactgtaccatccgtctgggccgtgtcttcccccatgacatcaactggaacaagtggatc
catttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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