KEGG   Rattus norvegicus (rat): 171073
Entry
171073            CDS       T01003                                 
Symbol
Hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2
  KO
K25065  hepatoma-derived growth factor-related protein 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    171073 (Hdgfl2)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     171073 (Hdgfl2)
SSDB
Motif
Pfam: LEDGF PWWP Med26 MUM1-like_PWWP
Other DBs
NCBI-GeneID: 171073
NCBI-ProteinID: NP_598232
RGD: 621013
Ensembl: ENSRNOG00000049142
UniProt: Q925G1
Position
9:996687..1016352
AA seq 669 aa
MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YDKCKDKYGKPNKRKGFNEGLWEIQNNPHASYSAPLPVSSSDSEAPEADLGGGSDADKEK
EARRVMTVTAVTTTATSGRTESDSDSDKNSDHSGLKRKTPVLKMSVSKRARKASSDLDQA
SVSPSEEDSESPSESEKTSDQDFTPEKKTIARAPRRAPLGGRKKKKVPSASDSDSRADSD
GAKEEPVVTAQPSPSSASSSSSSSASDSDVSIKKPPRGRKPAEKPPPKPRGRRSKPERPP
STSSSDSDSDSGEVDRISEWKRRDEERRRELEARRRREQEEELRRLREQEREEKERRKER
AERGGSSGEELEDEEPVKKRSRKARGRGTPSSSDSEPEGELGKEGKKLAKKSQLQGSESA
RKPGQKEKRGRPDEKPRARPVKVERTRKRSEGLSLDRKGEKKKEPSVEERLQKLHSEIKF
ALKVDNPDVRRCLSALEELGTLQVTSQILQKNTDVVATLKKIRRYKANKDVMAKAAEVYT
RLKSRVLGPKVEALQKVNKAGAEKERADGEKVEEQPGEQAPRELAEDEPSTDRSAPVNGE
AASQKGENTEDGAQEDGQDLEDGPRGGSSEELHDSPQDSSDPARPGNEHQDHERMQLASE
SADDDDEDS
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgccgcacgccttcaagcccggggacttagtgtttgccaagatgaagggctacccgcac
tggccggcccggatcgatgacattgctgatggtgctgtgaagccgccacctaacaaatac
cccatcttcttctttggaacgcatgaaacggcctttttgggacccaaggacctgttccct
tatgacaagtgcaaggacaagtacggaaagcccaacaagaggaaaggcttcaatgagggg
ctctgggagatccagaacaacccccacgccagctacagtgcgcctctgcctgtgagctcc
tctgacagtgaggcccctgaagccgacctgggtggtggcagtgacgcagacaaggaaaaa
gaagcccggagggtcatgactgtgacagctgtgaccaccacagccaccagtggcaggacg
gagagcgactccgactctgacaagaacagtgatcacagtggcctgaagcggaagacgcca
gtcttgaagatgtcagtctctaaacgagctagaaaggcctccagcgacctggatcaggcc
agtgtttccccatcggaagaggactctgagagcccatctgagtcagagaagaccagtgac
caggattttaccccagagaagaagacaatagcccgggctccacggcgggctcctctggga
ggacgcaaaaagaagaaggtgccgtcagcctcagattcagactccagagccgactcagat
ggggccaaggaggagcctgtggttacagcacagccgtctccgtcgtcggcctcctcctca
tcctcctcatccgcctcagattcagatgtgtccatcaagaaaccccctcgaggcagaaag
ccagctgagaagccaccccccaaaccccgagggcggagatcaaagccagaacgaccacct
tccacctccagcagtgacagtgacagtgacagtggtgaggtggaccgaatcagtgaatgg
aagaggcgtgatgaggagcgaaggcgagagctagaggctcggaggcgacgggagcaggag
gaagagctccggaggcttcgagagcaggagagggaagagaaggagcggcgcaaggagcgg
gcagagcgtgggggcagcagtggggaggagctggaggacgaggagcctgtgaagaagcgt
agccgcaaggctcggggccggggcacaccatcctcctctgactcagagcccgaaggggag
cttgggaaagaggggaagaagttggccaagaagtcccaactgcaaggctcagagtctgca
aggaagcctgggcagaaggagaagagagggcggccagacgagaagccaagagccaggcct
gtgaaggtggaacggacacggaagcggtcagagggtctctcactggacaggaagggggaa
aagaagaaagaaccttccgtagaggagagactgcaaaagctacacagcgagatcaaattt
gcactgaaggttgacaacccagatgtgaggaggtgtctgagtgcactggaagaactggga
accctgcaggtaacctctcagatccttcagaagaacacagatgtggtagcaacgctcaag
aagattcgccggtacaaggccaacaaagatgtgatggcgaaggcagcagaggtctacacc
cggctcaagtcgagggtcctggggccgaaagttgaggctctccagaaggtgaacaaagct
ggagccgagaaggaacgggccgatggcgagaaggtggaggaacagcctggggagcaggct
cccagagagctggcggaggatgagcccagcactgatcggtcagcacctgtgaatggtgaa
gccgcatcccagaagggagagaacacagaagatggagcacaggaagacgggcaggacttg
gaggatggccccaggggtggctcctcagaagagctgcatgacagcccacaggacagctct
gaccccgccaggcctgggaatgagcatcaggaccatgagaggatgcagttggcctctgag
tctgccgatgatgatgatgaggacagctga

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