KEGG   Rattus norvegicus (rat): 171119
Entry
171119            CDS       T01003                                 
Symbol
Dscam
Name
(RefSeq) cell adhesion molecule DSCAM precursor
  KO
K06767  Down syndrome cell adhesion molecule
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    171119 (Dscam)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  DSCAM family
   171119 (Dscam)
SSDB
Motif
Pfam: I-set Ig_3 fn3 Ig_2 ig V-set Ig_5 Pur_ac_phosph_N C2-set_2 Sp38 Ig_4 C1-set V-set_CD47 Interfer-bind fn3_2 ChitinaseA_N DUF6377 Adeno_E3_CR1 DUF4381
Other DBs
NCBI-GeneID: 171119
NCBI-ProteinID: NP_598271
RGD: 619992
Ensembl: ENSRNOG00000027992
UniProt: Q8VHZ8
Position
11:complement(49391385..49976861)
AA seq 2013 aa
MWILALSLFQSFANVFSEEPHSSLYFVNASLQEVVFASTSGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLVSGSRFLITSTGA
LYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFDHRKAMAGQ
RVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENSRPSDSGSYVCEVSNRYG
TAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGNEDQELSWYRNGEILNPGKNV
RITGLNHANLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGTPKIISAFSEKVVSP
AEPVSLVCNVKGTPLPTVTWTLDDDPILKGSGHRISQMITSEGNVVSYLNISSSQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
ANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPT
IVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTK
EVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVKART
ITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRM
YAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEII
TTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTSAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWM
KDSNGTPSLVTIDGRRSIFSNGSFVIRTVKAEDSGYYSCVANNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLEN
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
ANFATLNYDGSTIPPLIKSVVQSEEGLTTNEGLKILVTISCILVGVLLLFVLLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVVNMAVPKAHRPGDLIHLPPYLRMDFLLNRGAPGTSR
DLSLGQACLEPQKSRTLKRPTVLEPTPMEASSSTSSTREGQQSWQQGAVATLPQREGAEL
GQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq 6042 nt   +upstreamnt  +downstreamnt
atgtggatactggctctctccttgttccagagcttcgcgaatgttttcagtgaagagccc
cactccagcctctactttgtcaatgcatcgctgcaagaggtagtgtttgcaagcacgtcg
gggaccctggtgccctgcccggctgcaggcatccctcctgtgactctcagatggtaccta
gcaacgggcgaggagatctacgatgtccctgggatccgccacgtccatcccaatggcact
ctccaaattttcccctttcctccttcaagcttcagcaccttaatccatgataatacttac
tattgcacagctgaaaacccttcagggaaaattagaagtcaggatgtccacatcaaggct
gttttacgggagccctatacagtccgtgtggaggaccagaaaaccatgagaggcaatgtc
gcggtgttcaagtgcattatcccctcctcggtggaggcgtacgtcactgtcgtctcatgg
gagaaagacacggtttcacttgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattaaagatgtacagaacgaagatgggctgtacaactaccgctgcatcacgcgg
cacagatacacaggggagacgagacaaagcaacagcgcgagactgttcgtgtcagaccca
gcgaactcagccccatccatcctggacgggtttgaccaccgcaaagccatggcagggcag
cgtgtggagctgccgtgcaaagctcttgggcaccccgagccggactaccgctggctgaaa
gataacatgcccctggaactttccggaaggttccaaaagacagtgaccgggctgctcatt
gagaacagccgcccttcagactcaggcagctacgtgtgtgaagtatccaaccgatacggc
actgccaaggtgataggccgcctgtacgtgaaacagccactgaaagccaccatcagtccc
agaaaggttaaaagcagtgtgggcagccaggtctccttgtcctgcagtgtgacaggaaac
gaagaccaggagctctcctggtacagaaatggtgaaatcctcaaccctgggaaaaacgtg
aggatcacaggactcaaccacgcgaaccttataatggatcacatggtcaagagtgatggg
ggcgcctaccagtgctttgttcgcaaggacaagctatctgctcaagactatgtccaggtg
gtccttgaagacggaactcccaaaatcatttccgcctttagcgagaaagtggtgagcccg
gcagagccagtgtccctcgtgtgtaatgtgaagggtacacccttgcccacggtcacctgg
accctggacgatgaccccatcctcaagggcagcggccaccgcatcagccaaatgatcacg
tccgaggggaacgtggtcagctacctgaatatctccagctcccaggtccgggatgggggt
gtctaccgctgcactgccaacaactcggctggagtcgtcctgtaccaggctcgaataaac
gtaagagggccggcaagcatcagaccgatgaaaaacatcactgcgatagcagggcgtgac
acgtacatccactgccgtgtgattggctacccttattactccatcaagtggtacaagaac
gctaacctgcttcctttcaaccaccgccaggtggcgtttgagaacaatgggactctgaaa
ctctcagatgtgcagaaagaagttgacgagggagagtacacatgtaacgtgctggtgcag
ccacagctctccaccagccagagtgtccacgtgacagtcaaagttcctccttttatccaa
ccctttgagttcccaagattctctatcggtcagcgggtcttcatcccatgtgtggtggtc
tcgggggacttacccatcaccatcacctggcagaaggatggccggccgattccagcaagc
ctcggtgtaaccatcgacaacatcgacttcaccagctccctgaggatctccaacctctca
ctgatgcacaacgggaattacacctgcatcgcgcggaacgaggcggccgccgtggaacac
cagagccagctgattgtaagagttccccctaagttcgtggtccagccccgggaccaggat
gggatctatggcaaagcagtgattctcaattgctctgcagagggttatcctgtgcctaca
attgtgtggaaattctcaaaaggtgctggggtcccccagttccagccaattgccctgaat
ggcagaatccaggtcctgagtaatggctcactcttgatcaagcatgttgtggaagaagac
agtggctactacctctgcaaggtcagcaacgatgtgggcgcagacgtcagcaagtccatg
tacctcacggtgaaaattcctgccatgataacctcttatcccaacaccaccctggccact
cagggtcaaaggaaggagatgagctgcacagcacacggggagaagcccatcattgtccgc
tgggagaaagaggacaggatcattaaccctgaaatggcccgttacctggtgtccaccaag
gaggtgggagaggaagtgatttctactctgcagattttgccaacagtgagagaagattcc
ggcttcttctcctgccatgctatcaattcatatggggaggaccgcggaataattcagctc
acggtgcaagaacccccagacccccccgagattgagatcaaagatgtcaaagcccgcaca
atcacgctcaggtggaccatggggtttgatggcaacagccccatcacaggctacgacatt
gagtgcaaaaataaatcagactcctgggattctgctcaaagaaccaaagatgtttcccct
cagctgaactcggccaccatcattgatatccacccttcctccacctacagcatccgcatg
tacgccaagaaccggattggcaagagtgagcccagcaacgagatcaccatcacggcagat
gaggcagctcctgatggtccacctcaggaagtgcacctggaacccacctcatctcagagt
atcagggttacctggaaggctcccaagaaacatttacaaaatgggatcatacgtggctac
cagataggctaccgggagtacagcaccgggggcaacttccagttcaacatcatcagtatc
gacaccaccggggacagcgaagtgtacaccctggacaacctgaataagttcacccagtat
ggcctagtagtacaggcctgcaaccgggccggcacgggaccttcttctcaggagataatc
actaccaccctggaggacgtacccagctaccctcccgaaaatgtccaagccatagcaacc
tcaccagaaagcatatcaatctcctggtccacgctgtccaaggaggccttgaatgggatt
ctccaggggttcagggtcatctactgggccaacctcatagacggagagctgggcgagatt
aagaacgtcaccaccacgcagccttccttggagttggatggactagagaaatacaccaac
tacagtatccaggtgctggccttcacccgtgcaggggacggcgtccggagtgagcagatc
tttacccgtaccaaggaggatgttccaggtcctcctgctggtgtcaaggcagcagcagcc
tcggcctccatggtctttgtgtcctggctgcccccgctcaagctgaatggcatcattcgg
aagtacacggtgttctgctcccacccctaccccacagtcatcagcgagtttgaagcctcc
cctgactcattttcctacagaattcctaacctgagtcggaatcgacagtatagcgtctgg
gtggtggcagtgacttccgccggaagaggcaacagcagtgagatcatcaccgtggagcct
ctggctaaagctcctgcacggatcctcacgttcagtgggacagtgactactccgtggatg
aaggacatcgtcttgccgtgtaaagctgttggagacccatcacctgccgtaaaatggatg
aaggatagtaacgggacgcccagcctggtgacgattgatggccgcagaagcatcttcagc
aatgggagtttcgttattcgcacggtgaaggccgaggactctggctactacagctgtgtt
gccaataacaactggggatcagatgagatcatattaaatttgcaagtacaagttccacca
gatcagcctcggctcaccgtatccaagacgacatcctcctccatcaccctttcctggctt
cctggagacaatgggggcagctccatcagaggctacatcctgcaatattccgaggacaac
agtgagcagtgggggagctttcccatcagccccagcgagcgttcctaccgcttggaaaac
ctaaagtgtgggacatggtataagttcacccttactgcccaaaatggagtgggacccgga
cgcataagtgaaatcatagaagccaaaactctggggaaagaaccccagttctccaaggag
caggagctcttcgccagcatcaataccacccgagtgaggctgaatctgattggctggaac
gacggcggctgtccaatcacctcattcactcttgagtacagacccttcgggaccacggtc
tggaccacagctcagcggacctccctttccaagtcttacattctgtatgacctccaagaa
gccacatggtatgaactgcagatgcgagtgtgcaacagcgccggctgcgcagagaagcaa
gccaactttgccacgctgaactacgatggcagtacaatccctccactcattaagtcagtt
gtccaaagcgaagaagggctgacaaccaacgaagggctcaagatcctcgtgaccatctcc
tgcatcctggtcggggttctgctgctctttgtgcttctgctggtggtgcgaaggagacgg
agggagcagaggctgaagaggctgagagatgcaaagagtttagctgagatgctcatgagc
aagaacacacggacttcagataccttgagcaaacagcaacagactctgaggatgcacatt
gatatacccagggctcagcttttgattgaagagagagacacaatggagaccatagatgac
cgctccacagtcctgttaacggatgctgactttggggaggcagccaaacagaagtcactg
acggtgactcacacggtgcattaccaatcggtgtctcaggccaccgggcccctagtggat
gtctccgatgctcggccaggaacgaatcccaccaccaggaggaatgcaaaggctggaccc
acagcaagaaaccggtacgccagccagtggaccctcaacagaccccaccccaccatctca
gcacacactctcaccacagactggagactgcctacccccagggctacaggctccgtggac
aaggaaagtgacagctacagcgtcagcccatcacaagacacagacagagcaaggagcagc
atggtctccacagaaagtgcctcctctacctacgaagaactggccagggcctacgagcac
gccaagatggaggagcagctgaggcacgccaagttcaccatcacagagtgcttcatatcc
gacacgtcctccgagcagctgacggcagggacaaacgagtacacggacagtctgacctcc
agtaccccttcagaatcggggatctgcagattcactgcgtctccccccaaacctcaggat
ggaggtcgtgtggtgaacatggcggttccaaaggcccatcggccaggcgacctcatacac
ctgcctccatacctgcgaatggacttcttgttaaaccggggcgcaccaggcaccagcagg
gacctgagcttaggacaagcgtgcttggaaccccagaaaagtcggaccctgaagcgcccc
acggtccttgagcccacccctatggaggcttcctcctccacctcttccacgagagaagga
cagcagtcgtggcaacaaggggccgtggccaccttacctcagcgagagggtgcagagctg
ggacaggcagctaaaatgagcagctcccaagagtcgctgctggactctcggggccacttg
aaaggaaacaatccctacgcaaaatcctacaccttggtataa

DBGET integrated database retrieval system