KEGG   Rattus norvegicus (rat): 171124
Entry
171124            CDS       T01003                                 
Symbol
Mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    171124 (Mms19)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     171124 (Mms19)
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_2 Uso1_p115_head HEAT
Other DBs
NCBI-GeneID: 171124
NCBI-ProteinID: NP_001258525
RGD: 727890
Ensembl: ENSRNOG00000046769
UniProt: M0R6T4
Position
1:complement(250706595..250743604)
AA seq 1031 aa
MAAATALEEAAAPMGALCGLVQDFVMGQQEGPADQVAADVKSGGYTVLQVVEALGSSLEN
PEPRTRARGIQLLSQVLLQCHSLLLEKEAVHLTLFYENRLKDHHLVVPSVLQGLRALSLS
VALPRGLAVSVLKAIFQEVHVQSLLQVDRHTVFSIITNFMRSREEELKSLGADFTFGFIQ
VMDGEKDPRNLLLAFRIVHDLISKDYNLGPFVEELFEVTSCYFPIDFTPPPNDPYGIQRE
DLILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLP
SLWASIRREVFQTASERVEAEGLAALHSLTACLSCSVLRADAEDLLHPFLSSILQDCRHH
LCEPDMKLVWPSAKLLQAAAGASARACEHITSNVLPLLLEQFHKHSQSNQRRTILEMILG
FLKLQQKWSYEDRDERPLSNFKDQLCSLVFMALTDPSTQLQLVGIRMLTVLGAQPDLLSA
EDLELAVGHLYRLSLLEEDAQSCRVAALEASGSLATLYPGAFSSHLLPRLAEGLHQGESD
VARADGPTKCSRHFRCLQALSAVSTHPDIVKETLPLLLQHLCQAHKGNMITESSEVVAVC
QSLQQVAEKCQQDPESYWYFHKTAVPCLFALAVQASVPEKASSVLSKALLEDEVLAALAS
VIGTATTHLSPELAAQSVTCIVPLFLDGNTSFLPENSFPGHFQPFQGGSSGQRRLVALLM
AFVCSLPRNVEIPELTRLMQELLKQSCGHSCPFSSTAASKCFAGLLNKQPPGQQLDEFLQ
LSVDTVEAGLASESSRNQAFTLLLWVTKALVLRYHPLSASLTARLMGLLSDPELGCAAAD
GFSLLMSDCTDVLTRAGHADVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVL
NRLPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKF
LNLSSSHSMAVRIAALQCMHALTRLPTSVLLPFKSQVIRALAKPLDDKKRLVRKEAVSAR
GEWFLLGSPGS
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggctgccgccactgctctggaggaggcagcggcgcctatgggcgccctgtgtggcctc
gtgcaagacttcgtcatgggtcagcaggaggggcccgctgaccaggtggctgcagatgtg
aaatccggtggctatacagtgttacaagtagtagaagccctcgggtcctctctggagaat
ccagaaccccgaactcgggctcgaggaatccagcttttgtcacaggtgctactccagtgt
cactccttgctcttggagaaggaagcagtccacctgaccctgttctatgagaaccggctg
aaggaccaccatcttgtggtcccatctgtcctgcagggcctgagggcactgagcctgtct
gtggccctgccccggggcctggctgtctctgtgcttaaagccatcttccaggaggtacac
gtacagtccctgctacaggtagaccgccatactgtcttcagtatcatcactaacttcatg
cgatcacgagaagaagagctgaagagcctaggagctgacttcacatttggcttcatccag
gtgatggatggagaaaaggatccccgtaatcttttgttggctttccgcatcgtccacgac
ctcatctccaaggactacaatctgggaccttttgtggaagagttatttgaagtgacatct
tgttatttccctattgattttacccctcctcctaatgatccttatggcatccagagagag
gatctcatcctgagtctccgtgctgtgctggcttccacaccgcggtttgctgagttctta
ctgcctctgctaattgagaaagtggattctgagattttaagtgccaagctggattctctg
caaactctgaatgcttgctgtgctgtgtatggacagaaggagctaaaggacttcctcccc
agcctttgggcatccatccgcagagaggttttccagacagcgagtgagcgagtagaggct
gagggcctggcagctctccattccctgactgcgtgtctgtcttgctctgtgctgagagct
gatgctgaggacctcctccatcccttcctcagcagcattctacaagactgcaggcaccat
ctatgtgaaccagacatgaaacttgtatggcctagcgctaagctgttacaggcagctgca
ggtgcatctgcccgggcctgtgagcacatcaccagcaacgtgcttcccttgctgctggaa
cagttccacaagcacagccagagcaaccagcggcggacaatccttgaaatgatcctggga
ttcttaaagctgcagcagaaatggagctacgaagacagagatgaaaggcctctgagtaac
ttcaaagaccagctgtgctcattggtgttcatggctctaacggatcccagcacccagctt
cagcttgttggcatccggatgctgacggtcttgggtgcccagccagatctgctgtctgct
gaggacttggagttagcagtaggtcacctctaccgactgagcttgctggaggaagatgcc
cagagttgtagggtggcagcattggaggcatcaggatccctggccactctgtatcccgga
gccttcagcagccacttactacccaggcttgctgaggggctgcatcaaggggagtcagac
gtggctagagcggatgggcccaccaaatgttctcggcattttcgctgtctgcaagctttg
tcagctgtttcgacacatcccgacattgtcaaggagacactgcctctgctactgcagcat
ctctgtcaggcacacaaagggaatatgattacagagtccagtgaagttgttgctgtttgt
cagagtctccagcaggtggcagaaaaatgccagcaggaccctgagagctactggtatttc
cacaagactgctgtgccctgcctgtttgcattagctgtgcaggcttcagtgccagagaag
gcgtcctccgttctgagcaaagcactgttggaggatgaggtcttggccgcattggcttct
gtcattggcacagccactacccatctgagccctgaactagctgcccagagtgtcacatgc
atcgtgcccctcttcctagatggcaacacctcctttctacctgaaaacagcttcccaggc
cacttccagccattccagggcggctcctctgggcaaaggcggctggttgcactacttatg
gctttcgtctgctccctgccacgaaatgtggaaatccccgagctgacccgactcatgcag
gagcttttgaagcagagctgtggccacagctgtcccttctcctccactgctgcctccaag
tgctttgcagggctcctcaataagcagcctccagggcagcagttggatgagttcctccag
ctctctgtggacacagtggaggcgggtctggcctctgaatcctcccgtaatcaggctttc
acactgctgctctgggtaaccaaggctctagtcctcaggtaccatcctctcagtgccagc
ctaaccgctcggctcatgggcctcctcagcgacccagaactaggctgtgcagcagctgat
ggcttctctctgctcatgtctgactgcactgatgtgctgactcgggccggccatgctgat
gttcggatcatgttccgccagcgcttcttcacagacaatgtgcctgctttggtccagggt
ttccatgctgctccccaagatgtgaagccaaactatctgaagggtctatctcatgtactc
aacaggctgcctaagcctgtgcttttaccagagctgcccacactcctttccttgctgctg
gaggcactgtcctgccctgactctgtggtccagctttccactttgagctgtctccaaccc
ttactactggaagcaccccaaatcatgagtcttcatgttgatactctggtcacgaaattc
ctgaacctcagttccagtcattcaatggccgtccggattgctgctctgcagtgtatgcat
gctctcactcggctacccacttctgtgttgctgccattcaaatctcaggtgatccgagct
ttagccaagcctctggatgacaagaagagacttgtgcgcaaggaagcagtgtcagcaagg
ggagaatggttcctactggggagccctgggagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (23)   
   RefSeq(nuc) (7)   
   GenBank (8)   
   EMBL (8)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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