KEGG   Rattus norvegicus (rat): 171143
Entry
171143            CDS       T01003                                 
Symbol
Trpm4
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4
  KO
K04979  transient receptor potential cation channel subfamily M member 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04911  Insulin secretion
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09152 Endocrine system
   04911 Insulin secretion
    171143 (Trpm4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    171143 (Trpm4)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   171143 (Trpm4)
SSDB
Motif
Pfam: LSDAT_euk LSDAT_prok Ion_trans Csm1_N
Other DBs
NCBI-GeneID: 171143
NCBI-ProteinID: NP_001129701
RGD: 620244
Ensembl: ENSRNOG00000020714
UniProt: Q9ESQ5
Position
1:complement(104918462..104949453)
AA seq 1208 aa
MVGQEKEQSWIPKIFRKKVCTTFIVDLHDDAGGTLCQCGQPRDAHPSVAVEDAFGAAVVT
EWNSDEHTTEKPTDAYGDLDFTYSGRKSSNFLRLSDRTDPATVYSLVTRSWGFRAPNLVV
SVLGGSEGPVLQTWLQDLLRRGLVRAAQSTGAWIVTGGLHTGIGRHVGVAVRDHQTASTG
GSKVVAMGVAPWGVVRNRDMLINPKGSFPARYRWRGDPEDGVEFPLDYNYSAFFLVDDGT
YGRMGGENRFRLRFESYVAQQKTGVGGTGIDIPVLLLLIEGDEKMLKRIEDATQAQLPCL
LVAGSGGAADCLVETLEDTLAPGSGGLRRGEARDRIRRYFPKGDPEVLQAQVERIMTRKE
LLTVYSSEDGSEEFETIVLRALVKACGSSEASAYLDELRLAVAWNRVDIAQSELFRGDIQ
WRSFHLEASLMDALLNDRPEFVRLLISHGLSLGHFLTPVRLAQLYSAVSPNSLIRNLLDQ
ASHASSSKSPPANGAAELRPPNVGQVLRTLLGETCAPRYPARNTRHSLLGQDHRENDSLL
MDWANMQQDASFEQAPWSDLLIWALLLNRAQMAIYFWEKGSNSVASALGACLLLRVMARL
EWEAEEAARRKDLAAKFESMSVDLFGECYHNSEYRAARLLLRRCPLWGEATCLQLAMQAD
ARAFFAQDGVQSLLTQKWWGEMDSTNPIWALLLTFFCPPLIYTNLILFRKSEEEPTQKDL
DFDMDSSMNGAGPLGPAEPSAKVALERRRRRRPGHTLCCGGCSKRWSYFWGAPVTAFLGN
VVSYLLFLLLFAHVLLVDFQPTKPGVFELLLYFWAFTLLCEELRQGLGGGWGTLANGGPG
PGKAPLRHRLHLYLLDTWNQCDLLALTCFLLGVGCRLTPGLFDLGRTVLCLDFMIFTLRL
LHIFTVNKQLGPKIVIVSKMMKDVFFFLFFLCVWLVAYGVATEGILRPQDRSLPSILRRV
FYRPYLQIFGQIPQEEMDVALMNPSNCSAERGSWAHPEGPVAGSCVSQYANWLVVLLLIV
FLLVANILLLNLLIAMFSYTFNKVHGNSDLYWKAQRYSLIREFHSRPALAPPLIIISHLR
LLFKWLRRCHRTNLPASPVFEHFRVCLSKEAERTLLTWESVHKENFLLAQARDKRDSDSE
RLKRTSQKVDTALKQLGQIREYDRRLRGLEREVQHCSRVLTWMAEALSHSALLPPGGPPP
PSPTGSKD
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggtggggcaggagaaagagcagagttggatccctaagatcttcaggaagaaggtgtgc
acgacgttcatagtggacctccacgatgatgcgggagggaccttgtgccagtgtgggcaa
cctcgggatgcccacccttctgtggctgtggaggatgcctttggggcagccgtagttacc
gagtggaacagtgatgagcacaccacggagaagcccacagatgcctacggggacctggac
ttcacatactctggccgaaagtccagcaacttcctccggctgtctgatcgcacggatccg
gccactgtgtacagtctcgtcacccgctcttggggctttcgtgctccaaacttggtggtg
tcagtgctgggggggtcggagggccccgtgctacagacctggctgcaggaccttctgcgt
cgtgggctggtgcgagcagcccagagcacaggggcctggatcgtcactgggggactgcac
acaggcattggtcggcatgtgggtgtggctgtgagggaccaccagacggccagcaccggg
ggcagcaaggtggtggccatgggtgtggccccctggggagtggtccggaacagagacatg
ctgatcaaccccaagggctcattccctgcaagataccggtggcgtggtgaccctgaggac
ggagttgagttccccctggactataactattctgctttcttcttggtggatgatggtacc
tatggccgcatgggtggtgagaaccgcttccgccttcggtttgagtcctatgtggctcag
cagaagaccggagtgggagggactggaattgacatccctgtactccttcttctcatcgaa
ggcgatgagaagatgttaaagcggatagaggatgccacccaggctcagctcccctgcctc
ttggtggctggctctgggggtgctgcagactgcctggtggagaccctggaagatactctg
gccccagggagtgggggactcaggcgaggtgaagcccgggatcgaattagacgttacttc
cctaaaggagaccccgaggtcctgcaggcccaggtagagaggatcatgacccgaaaggag
ctgctgacagtctattcatcagaggacggctccgaggagtttgagactatcgttttgagg
gctcttgtgaaagcctgtgggagctccgaggcctcggcttacctggatgaactgcgtttg
gctgtggcttggaaccgcgtggacatcgcccaaagtgaacttttccgtggggacatccag
tggcggtccttccacctggaggcctctctcatggacgctctgctgaatgaccggcctgag
tttgtgcgcttgctcatctcccatggccttagtctgggacacttcctgacccccgtgcgc
ctggcccagctgtacagcgcagtgtcccccaactcgctgatccgcaatcttctggaccag
gcgtcccacgctagtagcagcaaatctccacctgcaaatggagctgcagagctccggcct
cctaatgtggggcaagttctgaggactctgttgggagaaacgtgtgcaccgcggtacccc
gccaggaacacccgacactccctgctgggccaggaccacagagagaatgactctctgctc
atggactgggccaacatgcaacaggatgcaagctttgaacaagccccctggagtgacctg
cttatctgggctctgttgttgaaccgagcccagatggccatttatttctgggagaagggc
tccaactcagtggcctctgctctcggggcttgtctcttactccgagtgatggctcgcctt
gagtgggaggctgaggaagctgcacggcggaaggaccttgctgccaagtttgaaagcatg
agcgtggacctctttggagagtgttaccacaacagtgaatatcgagcagcccgccttctt
ctgcgtcgctgtcccctctggggagaggccacctgtctccagcttgccatgcaggctgac
gcccgtgcgttctttgcccaggatggagtacagtctctgctgacacagaagtggtggggg
gagatggacagcacgaaccctatctgggccctgcttctcaccttcttctgcccgcctctc
atctacaccaacctcatcctcttcaggaagtcagaggaggagcccacacagaaggatctt
gacttcgatatggacagcagcatgaatggagcaggtcctcttgggcctgcggagccctca
gcaaaggtggcccttgagaggcggcggcggcggcggccaggacataccctctgctgtggc
gggtgctccaagcgctggtcgtacttttggggcgccccagtgaccgccttcctgggtaac
gtggtcagttacctgctgttcctgctgctgtttgcacacgtgttgctggtggatttccag
cctacaaagccgggcgtcttcgagctgctgctgtacttctgggccttcacgctgctatgc
gaggagctgcgccagggcctgggcggtggctggggtaccctggccaacgggggacctggt
cctggcaaagctcccctgcgccatcgtctgcacctctacctcttggatacttggaaccag
tgcgacttgctggcactcacctgcttcctgctgggcgttggctgcaggctgactcctggc
ctgtttgacttgggacgcacagtcctctgtcttgacttcatgatcttcacactgcgcctg
ctgcacatcttcacggtgaacaagcagctggggcccaagattgtcatcgtgagcaagatg
atgaaggatgtattctttttcctcttcttcctctgcgtgtggcttgtagcttatggggtg
gccacagaggggatcctgaggccccaggaccgcagtctaccgagcatcctgcgcagggtc
ttctaccgtccgtatctgcagatcttcggacaaattccccaggaggaaatggatgtggcc
ctcatgaatcccagtaactgctctgccgagcggggctcctgggctcacccggaggggccg
gtcgcaggctcctgtgtgtcccagtatgccaactggctggtggtgttgctcctcatcgtc
ttcttgctggtggccaatatcctgctgctcaatctgctcatcgccatgttcagctacacc
ttcaacaaagtgcatggcaacagcgacctctactggaaggcgcagcgctacagcctcatc
cgggaattccattcgcggcctgccctggccccacccctcatcatcatctctcacctgcgt
ctcctcttcaagtggctgcgcaggtgtcataggactaacttgcccgcctccccagtcttc
gagcacttccgtgtctgtctctctaaggaagcagagaggacgctgctgacttgggagtct
gtgcacaaagagaacttcctattggcacaagctcgtgacaagcgagacagcgactcggag
cgtctgaaacgcacgtcccagaaggtggacactgcactgaagcagctgggacagatcaga
gagtatgaccggcgtctgagggggctggagagagaggtccaacactgttctcgagtcctg
acttggatggctgaggcccttagccactctgccttactgcctccaggggggccaccccct
ccaagccccactgggtccaaagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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