KEGG   Rattus norvegicus (rat): 171152
Entry
171152            CDS       T01003                                 
Symbol
Taf9b
Name
(RefSeq) transcription initiation factor TFIID subunit 9B
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    171152 (Taf9b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    171152 (Taf9b)
   03036 Chromosome and associated proteins [BR:rno03036]
    171152 (Taf9b)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     171152 (Taf9b)
   Coactivators
    SAGA/TFTC/STAGA complex
     171152 (Taf9b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     171152 (Taf9b)
    STAGA complex
     171152 (Taf9b)
    TFTC complex
     171152 (Taf9b)
    SAGA complex
     171152 (Taf9b)
    SLIK complex
     171152 (Taf9b)
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP Histone CENP-T_C LonB_AAA-LID
Other DBs
NCBI-GeneID: 171152
NCBI-ProteinID: NP_598299
RGD: 621116
UniProt: Q62880
Position
X:complement(75354823..75366166)
AA seq 253 aa
MAPLKNAPRDALVMAQILKDMGITDYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPT
VDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAP
NYRLKSLVKKGPNQGRLVPRLSVGAVSSRPTTPTVAPPQAVSVPNKVATPVSVTSQRFAV
QIPTSQSTPAKPAPAATSVQNVLINPSMIGSKNILITTNMVSSQSTATDSNPLKRKHDDD
DDDDDDDDDNDTM
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcgcctctcaagaacgctccgagggatgccttggtgatggcacagatcctgaaggat
atgggaatcacagattatgagccaagggttataaatcaaatgttggaatttgccttccga
tatgtgactacaattctggatgatgcaaaaatttattcaagtcacgctaagaaacctact
gtggatgcagatgatgtgagactggccatccagtgtcgggctgaccagtcttttacctct
cctcctccaagagattttttactggatattgcaaggcagaagaatcaaacccctctgccg
ctgattaaaccatatgcaggacctagattgccacctgatagatactgcttaacagctcca
aactataggctgaagtccttagttaaaaagggacctaaccaaggaagactagttcctaga
ttaagtgtcggtgcggtcagtagcagacctactactcctactgtagcacccccacaagca
gtatctgtcccaaataaggttgcaactccagtgtcagtgacaagccaaagatttgccgtg
cagattccaacttctcagtccacgcctgccaaaccagctcctgcagcgacttcagtccaa
aatgttctgattaatccttcaatgattgggtccaaaaatattctcattaccaccaacatg
gtttcctcacagagcacagccactgactcaaacccactgaagaggaaacatgatgatgat
gatgatgacgacgacgatgatgatgacaatgacactatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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