KEGG   Rattus norvegicus (rat): 171329
Entry
171329            CDS       T01003                                 
Symbol
Usp15
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15
  KO
K21343  ubiquitin carboxyl-terminal hydrolase 15 [EC:3.4.19.12]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    171329 (Usp15)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    171329 (Usp15)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    171329 (Usp15)
   04121 Ubiquitin system [BR:rno04121]
    171329 (Usp15)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     171329 (Usp15)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   171329 (Usp15)
Membrane trafficking [BR:rno04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    171329 (Usp15)
Ubiquitin system [BR:rno04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    171329 (Usp15)
SSDB
Motif
Pfam: UCH Ubiquitin_3 DUSP UCH_1 USP7_C2 USP7_ICP0_bdg Choline_bind_1
Other DBs
NCBI-GeneID: 171329
NCBI-ProteinID: NP_660185
RGD: 628795
Ensembl: ENSRNOG00000023202
UniProt: Q9R085
Position
7:complement(60643611..60805137)
AA seq 952 aa
MAEGGAADLDTQRSDIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNV
YPGPIDNSGLLKDGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQ
GMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKEARLW
NKYMSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDGTWPRGPSAPNVKNSNYCLPSYT
AYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFD
NPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLL
DGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCP
ECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTAL
SALSGVPADKMIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTEDTEHVVIPV
CLREKFRHSSYTHHTGSSLFGQPFLMAVPRNNTEDKLYNLLLLRMCRYVKMSTETEETDG
PLRCCEDQNINGNGPNGIHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDND
SENGLCTEETCKGRLTGHKKRLFTFQFNNLGNTDINYIKDDTRHIRFDDRQLRLDERSFL
ALDWDPDLKKRYFDENAAEDFEKHESVEYKPPKRPFVKLKDCIELFTTKEKLGAEDPWYC
PNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPN
AGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDSSVSSASEDQIVSKAAYVLF
YQRQDTFSGTGFFPLDRETKGASAATGVPLESDEDSNDNDNDLENENCMHTN
NT seq 2859 nt   +upstreamnt  +downstreamnt
atggcggaaggcggagcggcggacctggacacccagcgttctgacatcgcgacgctgctc
aaaacctcgctccggaaaggggacacctggtatctagtagatagtcggtggttcaaacag
tggaaaaaatatgttggctttgacagttgggacaaataccagatgggagatcaaaatgtc
tatcctggacccatcgataactctggacttctcaaagatggcgatgctcagtcacttaag
gaacaccttatcgacgagttggattacatactgttgccgactgagggctggaataaactt
gtcagctggtacacactgatggaaggccaagagccaatagcaagaaaggtggtagaacag
ggcatgtttgtaaagcactgcaaagtggaagtctacctcacagaactgaagctctgcgag
aatgggaacatgaacaatgttgtaactcggagatttagcaaagctgacacaatagacaca
attgaaaaggaaataagaaagatcttcaatattccagatgaaaaggaggccagactgtgg
aacaagtatatgagtaacacatttgagccactgaataagccagacagcaccatccaggat
gccggcctataccaaggacaggtgttagtgatagaacaaaaaaatgaagacggaacgtgg
cccaggggtccctctgctcctaatgtgaaaaactccaattattgtctcccgtcatatact
gcttacaagaactatgattattcggaacctggaagaaacaatgaacagccaggcctgtgt
ggcctaagtaacttgggaaacacatgtttcatgaactcagccattcagtgtttgagcaac
acacctccacttactgaatatttcctcaatgataagtaccaagaagagctgaattttgac
aatcccttaggaatgagaggtgaaatagctaaatcatatgctgaactcatcaagcagatg
tggtctggaaagtttagctatgtcactccaagagcatttaagacacaagtaggacgtttt
gcacctcagttctctggatatcaacagcaagactgccaagaactactagctttcctatta
gatggattacatgaggatttgaatagaattaggaaaaaaccatatatccagttaaaagat
gctgatgggaggccagacaaggtggttgctgaagaagcctgggaaaaccatttaaaaaga
aatgattctatcatagtagatatatttcatggccttttcaagtctacgttagtgtgtcct
gagtgtgctaagatctcagtgaccttcgaccctttctgttacttgacacttccattgcct
atgaaaaaggaacgtagcttagaagtttatttagttagaatggatccacttgctaaacct
atgcaatacaaagtcattgtgcccaaaattggaaatatactagacctttgtacagcactg
tctgctttgtcgggagtacctgcagataagatgatagtcactgacatatataatcataga
tttcacaggatatttgcaatggatgagaacctgagtagtattatggagcgggatgatatt
tatgtgtttgaaattaacatcaacaggacagaagacacagaacatgtggttattcctgtt
tgcctaagagaaaagttcagacactcaagttacactcaccacactggctcttcactgttc
ggccagccttttcttatggccgtgccacggaacaatactgaagataaactctacaatctc
ctgctcttgagaatgtgccggtatgtcaagatgtctactgaaactgaggaaactgatgga
cccctgcgttgctgtgaggaccagaatattaatgggaatggtccaaatggcatacatgaa
gaaggctcaccaagtgagatggagacagatgaaccagatgatgagtccagccaggatcaa
gagcttccctcagaaaatgagaacagtcagtctgaagattcagtcggaggagataacgat
tctgaaaatggattgtgtactgaagaaacatgcaaaggtcgactgacgggacacaaaaag
cgattgtttacattccagttcaacaacttaggcaacactgatatcaactatatcaaagac
gacaccaggcatataagatttgatgataggcagcttcggctagatgaaagatcttttctc
gccttggactgggaccctgacttgaagaagagatattttgatgagaatgctgcagaggat
tttgaaaaacatgaaagcgtggaatataaacctccaaaaagaccctttgtgaagttaaaa
gactgcattgaacttttcacaacaaaagagaagctaggtgctgaagacccctggtattgt
ccaaattgtaaagagcatcagcaagccaccaagaaattagatctgtggtccctgcctccc
gttcttgtggtgcatctcaagagattctcctatagtcgctacatgagagacaagctagat
acattagtcgattttcccatcagtgacttggatatgtcggaattcctaattaacccaaat
gcaggcccttgccgctataatttgattgctgtttccaatcactatggagggatgggagga
ggacattatactgcttttgcaaagaacaaagatgatggaaagtggtactattttgatgac
agtagcgtctccagtgcatctgaagaccaaattgtgtccaaagcagcatacgtgctcttc
taccagagacaggacactttcagtggaactggcttcttccctctcgaccgagaaactaaa
ggtgcttcagctgccacaggtgtccccctggaaagtgacgaagacagcaatgataatgac
aatgatctagaaaatgaaaactgtatgcacactaattaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (14)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (12)   
DNA sequence (21)   
   RefSeq(nuc) (17)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (56)   

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