KEGG   Rattus norvegicus (rat): 171373
Entry
171373            CDS       T01003                                 
Symbol
Slc12a5
Name
(RefSeq) solute carrier family 12 member 5 isoform 2
  KO
K23967  solute carrier family 12 (potassium/chloride transporter), member 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04727  GABAergic synapse
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    171373 (Slc12a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    171373 (Slc12a5)
Transporters [BR:rno02000]
 Solute carrier family (SLC)
  SLC12: Electroneutral cation-coupled Cl cotransporter
   171373 (Slc12a5)
SSDB
Motif
Pfam: AA_permease SLC12 AA_permease_2
Other DBs
NCBI-GeneID: 171373
NCBI-ProteinID: NP_599190
RGD: 620811
Ensembl: ENSRNOG00000018111
UniProt: Q63633
Position
3:174115833..174155112
AA seq 1116 aa
MLNNLTDCEDGDGGANPGDGNPKESSPFINSTDTEKGREYDGRNMALFEEEMDTSPMVSS
LLSGLANYTNLPQGSKEHEEAENNEGGKKKPVQAPRMGTFMGVYLPCLQNIFGVILFLRL
TWVVGIAGIMESFCMVFICCSCTMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAV
GLCFYLGTTFAGAMYILGTIEILLAYLFPAMAIFKAEDASGEAAAMLNNMRVYGTCVLTC
MATVVFVGVKYVNKFALVFLGCVILSILAIYAGVIKSAFDPPNFPICLLGNRTLSRHGFD
VCAKLAWEGNETVTTRLWGLFCSSRLLNATCDEYFTRNNVTEIQGIPGAASGLIKENLWS
SYLTKGVIVERRGMPSVGLADGTPVDMDHPYVFSDMTSYFTLLVGIYFPSVTGIMAGSNR
SGDLRDAQKSIPTGTILAIATTSAVYISSVVLFGACIEGVVLRDKFGEAVNGNLVVGTLA
WPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAISRDGIVPFLQVFGHGKANGEPTWALLL
TACICEIGILIASLDEVAPILSMFFLMCYMFVNLACAVQTLLRTPNWRPRFRYYHWTLSF
LGMSLCLALMFICSWYYALVAMLIAGLIYKYIEYRGAEKEWGDGIRGLSLSAARYALLRL
EEGPPHTKNWRPQLLVLVRVDQDQNVVHPQLLSLTSQLKAGKGLTIVGSVLEGTFLDNHP
QAQRAEESIRRLMEAEKVKGFCQVVISSNLRDGVSHLIQSGGLGGLQHNTVLVGWPRNWR
QKEDHQTWRNFIELVRETTAGHLALLVTKNVSMFPGNPERFSEGSIDVWWIVHDGGMLML
LPFLLRHHKVWRKCKMRIFTVAQMDDNSIQMKKDLTTFLYHLRITAEVEVVEMHESDISA
YTYEKTLVMEQRSQILKQMHLTKNEREREIQSITDESRGSIRRKNPANTRLRLNVPEETA
CDNEEKPEEEVQLIHDQSAPSCPSSSPSPGEEPEGEGETDPEKVHLTWTKDKSAAQKNKG
PSPVSSEGIKDFFSMKPEWENLNQSNVRRMHTAVRLNEVIVNKSRDAKLVLLNMPGPPRN
RNGDENYMEFLEVLTEQLDRVMLVRGGGREVITIYS
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgctcaacaacctgacggactgcgaggacggcgatgggggagccaacccgggtgacggc
aatcccaaggagagcagccccttcatcaacagcacggacacggagaaggggagagagtat
gatggcaggaacatggccctgtttgaggaggagatggacaccagccccatggtatcctcc
ctgctcagtgggctggccaactacaccaacctgcctcagggaagcaaagagcacgaagaa
gcagaaaacaatgagggcggaaagaagaagccggtgcaggccccacgcatgggcaccttc
atgggcgtgtacctcccgtgcctgcagaacatctttggtgttatcctctttctgcggctc
acttgggtggtgggaatcgcaggcatcatggagtccttctgcatggtcttcatctgctgc
tcctgcacgatgctcacagccatttccatgagcgcaattgcaaccaatggtgttgtgcct
gctggtggctcctactacatgatttccaggtctctgggcccggagtttgggggcgccgtg
ggcctctgcttctacctgggcactacctttgctggggctatgtacatcctgggcaccatc
gagatcctgctggcttacctcttcccagcaatggccatcttcaaggcagaagatgccagt
ggggaggcagccgccatgttgaataacatgcgggtgtatggcacctgtgtgctcacctgc
atggccaccgtagtctttgtgggcgtcaagtacgtgaacaagtttgccctggtcttcctg
ggttgcgtgatcctctccatcctggccatctacgcaggggtcatcaagtctgccttcgat
ccacccaatttcccgatttgcctcctggggaaccgcacgctgtctcgccatggctttgat
gtctgtgccaagctggcttgggaaggaaatgagacggtgaccacacggctctggggccta
ttctgttcctcccgcctcctcaatgccacctgtgatgagtacttcacccgaaacaatgtc
acagagatccagggcattcctggtgctgcaagtggcctcatcaaagagaacctgtggagt
tcctacctgaccaagggggtgatcgtggagaggcgtgggatgccctccgtgggcctggca
gatggtacccccgttgacatggaccacccctatgtcttcagtgatatgacctcctacttc
accctgcttgttggcatctatttcccctcagtcacagggatcatggctggctcgaaccgg
tccggagacctgcgggatgcccagaagtctatccctactggaactatcttggccattgct
acgacctctgctgtctacatcagctctgttgttctgttcggagcctgcatcgaaggggtc
gtcctacgggacaagtttggggaagctgtgaatggcaatctggtggtgggcaccctggcc
tggccttctccttgggtcattgtcataggctctttcttctctacctgcggagctggacta
cagagcctcacaggggccccacgcctgctgcaggccatctcccgggatggcatagtgccc
ttcctgcaggtctttggccatggcaaagccaacggagagccaacctgggcgctgctgctg
actgcctgcatctgtgagatcggcatcctcatcgcctccctggatgaggtcgcccctatc
ctttccatgttcttcctgatgtgttacatgtttgtgaacttggcttgcgcggtgcagaca
ctgctgaggacgcccaactggaggccacgtttccgatattaccactggaccctctccttc
ctgggcatgagcctctgcctggccctgatgttcatttgctcctggtattatgcgctggta
gctatgctcattgctggcctcatctataagtacatcgagtaccggggggcagagaaggag
tggggggatgggatccgaggcctgtctctcagtgcagctcgctatgctctcttgcgtctg
gaggaaggacccccgcatacaaagaactggaggccccagctactggtgctggtgcgtgtg
gaccaggaccagaacgtggtgcacccgcagctgctgtccttgacctcccagctcaaggca
gggaagggcctgaccattgtgggctctgtccttgagggcacctttctggacaaccaccct
caggctcagcgggcagaggagtctatccggcgcctgatggaggctgagaaggtgaagggc
ttctgccaggtagtgatctcctccaacctgcgtgacggtgtgtcccacctgatccaatcc
gggggcctcgggggcctgcaacacaacactgtgctagtgggctggcctcgcaactggcga
cagaaggaggatcatcagacatggaggaacttcatcgaactcgtccgggaaactacagct
ggccacctcgccctgctggtcaccaagaatgtttccatgttccccgggaaccctgagcgt
ttctctgagggcagcattgacgtgtggtggatcgtgcacgacgggggcatgctcatgctg
ttgcccttcctcctgcgtcaccacaaggtctggaggaaatgcaaaatgcggatcttcacc
gtggcgcagatggatgacaacagcattcagatgaagaaagacctgaccacgtttctgtac
cacttacgaattactgcagaggtggaagtcgtggagatgcacgagagcgacatctcagca
tacacctacgagaagacattggtaatggaacaacgttctcagatcctcaaacagatgcac
ctcaccaagaacgagcgggaacgggagatccagagcatcacagatgaatctcggggctcc
attcggaggaagaatccagccaacactcggctccgcctcaatgttcccgaagagacagct
tgtgacaacgaggagaagccagaagaggaggtgcagctgatccatgaccagagtgctccc
agctgccctagcagctcgccgtctccaggggaggagcctgagggggagggggagacagac
ccagagaaggtgcatctcacctggaccaaggataagtcagcggctcagaagaacaaaggc
cccagtcccgtctcctcggaggggatcaaggacttcttcagcatgaagccggagtgggaa
aacttgaaccagtccaacgtgcggcgcatgcacacagctgtgcggctgaacgaggtcatc
gtgaataaatcccgggatgccaagttggtgttgctcaacatgcccgggcctccccgcaac
cgcaatggagatgaaaactacatggaattcctggaggtcctcactgagcaactggaccgg
gtgatgctggtccgcggtggtggccgagaggtcatcaccatctactcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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