KEGG   Rattus norvegicus (rat): 171390
Entry
171390            CDS       T01003                                 
Symbol
Nlrp6
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 6
  KO
K20863  NACHT, LRR and PYD domains-containing protein 6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    171390 (Nlrp6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:rno04054]
    171390 (Nlrp6)
Pattern recognition receptors [BR:rno04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   171390 (Nlrp6)
SSDB
Motif
Pfam: NACHT NLRC4_HD2 PYRIN NOD2_WH Ribosomal_60s AAA_16 nSTAND3 DUF3764
Other DBs
NCBI-GeneID: 171390
NCBI-ProteinID: NP_599202
RGD: 708549
Ensembl: ENSRNOG00000045677
UniProt: Q63035
Position
1:205434484..205441245
AA seq 881 aa
MDAAGASCSSSEAVARELLLAALQDLSQEQLKRFRHKLRDAPLDGRSIPWGRLEHSDAVD
LTDKLIEFYAPEPAVDVTRKILKKADIRDVSLRLKEQQLQRLGSSSALLTVSEYKKKYRE
HVLRQHAKVKERNARSVKINKRFTKLLIAPGSGAGEDELLGTSGEPEPERARRSDTHTFN
RLFRGNDDEGPRPLTVVLQGPAGIGKTMAAKKILYDWAGGKLYHSQVDFAFFMPCGELLE
RPGTRSLADLILEQCPDRTAPVRRILAQPHRLLFILDGADELPTLAAPEATPCRDPFEAT
SGLRVLSGLLSQELLPSARLLVTSRNATLGRLQGRLCSPQCAEVRGFSDKDKKKYFFKFF
RDERKAERAYRFVKENETLYALCFVPFVCWIVCTVLLQQMELGRDLSRTSKTTTSVYLLF
ITSMLKSAGTNGPRVQGELRMLCRLAREGILKHQAQFSEKDLERLKLQGSQVQTMFLSKK
ELPGVLETVVTYQFIDQSFQEFLAALSYLLDAEGAPGNSAGSVQMLLNSDAGLRGHLALT
TRFLFGLLSTERIRDIGNHFGCVVPGRVKQDTLRWVQGQSQPKVATVGAEKKDELKDEEA
EEEEEEEEEEEEELNFGLELLYCLYETQEDDFVRQALSSLPEMVLERVRLTRMDLEVLSY
CVQCCPDGQALRLVSCGLVAAKEKKKKKKSFMNRLKGSQSTGKQPPASLLRPLCEAMITQ
QCGLSILTLSHCKLPDAVCRDLSEALKVAPSLRELGLLQNRLTEAGLRLLSQGLAWPKCK
VQTLRIQMPGLQEVIHYLVIVLQQSPVLTTLDLSGCQLPGTVVEPLCSALKHPKCGLKTL
SLTSVELTENPLRELQAVKTLKPDLAIIHSKLGTHPQPLKG
NT seq 2646 nt   +upstreamnt  +downstreamnt
atggatgccgctggagcctcctgctccagctcggaggcggtggcaagggaactgcttctg
gccgcactgcaggatctgagccaggagcagctgaagcgttttcgccacaagctccgggat
gcgcccctggatggccgcagcatcccgtgggggcgactggagcactcagacgctgtggac
ctcacagacaagctgattgagttctatgcgccagagccagccgtagatgtgacccgaaag
atcctgaagaaggcggatattcgagatgtgtcgttgcgactcaaggagcagcagctgcag
aggctcggctccagctcggcgcttctcaccgtgtcggagtacaagaagaagtaccgcgag
cacgtgctacgacagcatgctaaggtgaaggagaggaatgcccgctccgtgaagatcaac
aagcgcttcaccaagctgctcattgcgccggggagcggcgccggggaggacgagctgctg
ggaacgtcgggggagcccgagcccgagcgcgcaaggcgctcggacacacacactttcaat
cggctcttccgaggaaatgatgacgagggcccgcggccgctgaccgtggtgctgcagggc
ccggcaggcatcggcaaaaccatggccgccaagaaaatcctctacgactgggcaggaggc
aagctataccacagccaagtggactttgccttcttcatgccgtgcggcgagctgctggag
cggccaggtacgcgcagcttggcggacctgatactggaacagtgcccggaccgcaccgcg
ccggtgcggcggatactagcgcaaccgcatcgtctactgttcatcctggacggtgcagac
gaattgcctactttagcagccccagaagccactccctgcagagaccctttcgaggctacg
agtggcttgagagtgctgagcgggctgctgagccaggagctgttaccatcggctcgcttg
ctggtgacttcacgcaacgccaccctcgggaggctgcagggcagactttgctcaccacag
tgcgcagaagtgcgcggcttctcagacaaagacaagaaaaagtatttcttcaagtttttc
cgggacgagaggaaggcagagcgcgcttaccgcttcgtgaaagagaatgagacgctgtac
gcactgtgctttgtgccgtttgtgtgctggatcgtgtgcaccgtgctgctgcagcaaatg
gagctgggccgggatctgtctcgtacctccaagaccactacatctgtgtacctgctcttc
atcaccagcatgctgaagtctgcaggtaccaatggaccccgggttcagggagagctgcga
atgctgtgccgcctggcccgggagggcatcctgaagcatcaagcacagttctcagaaaag
gacctggagagattgaagcttcagggttcccaagttcagacaatgtttctcagcaagaag
gagctgccaggagtgctagaaactgtggtcacctaccagttcattgaccagagcttccag
gagttcttggctgcattgtcatacctactagacgctgagggagccccagggaactccgca
ggaagtgtgcagatgctcctgaactctgacgcggggctgcgtggtcatctggcactcacc
actagattcctctttggactgctaagtacagagaggattcgtgacattggaaaccatttt
ggctgtgtggtgccagggcgtgtgaaacaggacaccttgcggtgggtacaaggacaaagc
caacccaaggtggcgacagtaggagcagaaaagaaggatgagctgaaggacgaggaagca
gaggaggaggaggaggaggaggaagaagaggaggaggaactcaactttggactggagctg
ttgtactgcctgtatgagacacaagaggatgattttgttcgccaggctctcagcagcctt
ccagagatggtactggagcgagttaggctgacccgcatggaccttgaggttctgagctac
tgcgtgcagtgctgcccggacggccaggctctgagactggtgagctgtggactggtggcg
gcaaaggagaagaagaagaagaagaagagcttcatgaaccggctgaagggttctcaaagc
accgggaaacaacccccagcctccttgctgcgtccactctgtgaggcaatgattacccag
caatgtggtctgagtattctgaccttgtcacactgcaaactccctgatgcagtttgtcga
gacctttctgaggctctgaaggtagctccttccctaagggagctgggcctcctccagaac
cgactcactgaggcaggcctgcgtttactaagccaaggcctggcttggcccaaatgcaag
gtgcagacactcaggatacagatgcctggcctccaagaggtgatccactacctggtcatt
gtgctccagcagagcccagtcctaaccactctggacctcagtggctgtcagctgcctggc
actgtggtggaacctctgtgttcagccctgaagcaccctaaatgtggcctaaagaccctc
agtctgacttctgtggagctgactgagaatccactgagagagcttcaagctgtgaagaca
ttaaagccagatctggccatcatacattcaaaattgggcacacatcctcagcctctgaag
ggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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