KEGG   Rattus norvegicus (rat): 171393
Entry
171393            CDS       T01003                                 
Symbol
Clstn3
Name
(RefSeq) calsyntenin-3 precursor
  KO
K22661  calsyntenin 3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    171393 (Clstn3)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Cadherin related
   171393 (Clstn3)
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_3
Other DBs
NCBI-GeneID: 171393
NCBI-ProteinID: NP_599203
RGD: 621153
Ensembl: ENSRNOG00000011156
UniProt: Q8R553
Position
4:complement(159017795..159051069)
AA seq 957 aa
MTLLLVSLLLASLLQISSGNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFALDKDAPLR
YAGEICGFRLHGSGVPFKAVILDKATGEGLIRAKEPVDCEAQKEHTFTTQAYDCVDGPDG
ANTKKSHKATVHVRVNDVNEFAPVFVERLYRAAVTEGKLYDRILRVEAIDGDCSPQYSQI
CYYEILTPNTPFLIDNDGNIENTEKLQYSGEKLYKFTVTAYDCGKKRAADDAEVEIQVKP
TCKPSWQGWNKRIEYAPGAGSLALFPGIRLETCDEPLWNIQATIELQTSHVAKGCDRDNY
SERALRKLCGAATGEVDLLPMPGPNANWTAGLSVHYSQDSSLIYWFNGTQAVQVPLGGPA
GLGSGPQDGLSDHFTLSFWMKHSVTPSKGKKEEETIVCNTIQNEDGYSHYSLTVHGCRIA
FLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYTDGISFDPALIHDNGLIH
PPRREPALMIGACWSEEKNKEKEKGGENSTDTTSGDPLPIHHYFHGYLAGFSVRSGRLES
REVIECLYACREGLDYRDFESLGKGMKVHVNPSQSLLTLEGDDVETFNHALQHVAYMNTL
RFATPGVRPLRLTTAVKCFSEESCVSIPEVEGYVVVLQPDAPQILLSGTAHFARPAVDFE
GPEGVPLFPDLQITCSISHQVEAKADESWQGTVTDTRMSDEIVHNLDGCEISLVGDDLDP
ERESLLLDMASLQQRGLELTNRSAYLTIAGVETITVYEEILRQARYQLRHGAALYARKFR
LSCSEMNGRYSSNEFIVEVNVLHSMNRVAHPSHVLSSQQFLHRGHQPPPEMAGHSLASSH
RNSMVPSAATLIIVVCVGFLVLMVILGLVRIHSLHRRVSGTGGPSGASADPKDPDLFWDD
SALTIIVNPMESYQNQQTGVAGVAGGQQEEEDSSDSEAADSPSSDERRIIESPPHRY
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgaccctcctgctggtgtccctcttgctggcctctctgcttcagatcagctctggcaac
aaagcgaacaagcataagccatggatcgaggccgagtaccagggcatcgtcatggagaat
gacaacacggtcctgttgaatccgccactctttgccttggacaaagatgctccgctgcgc
tatgcaggtgagatctgtggcttccggctccatgggtctggggtaccctttaaggctgtg
atcctggacaaggcaacaggtgaagggctgatccgggccaaggagcctgtggactgcgag
gcccagaaggagcacacctttaccacccaggcttatgactgtgtagatgggcccgatggt
gccaataccaagaagtctcacaaggcgaccgtgcatgttcgggtcaacgatgtgaatgag
tttgccccagtctttgtggagcgtctctaccgtgctgcagtgactgaggggaagctgtat
gatcgcatcttacgtgtggaagccattgatggtgactgctcccctcagtacagccagatc
tgctactatgagatccttacacccaacacccctttcctcattgacaatgatggcaacatt
gagaacacagagaagttacagtacagtggtgagaagctctataagttcacagtgacagca
tatgactgtgggaagaagcgagcagcagatgatgctgaggtggaaatccaggtgaagccc
acctgcaaacccagctggcaaggctggaacaaaaggattgaatatgccccaggagcgggg
agcttggctttgttccctggcatccgcctggagacctgtgatgagccactgtggaacatt
caggccaccatagagctgcagaccagccatgtggccaagggctgtgaccgagacaactac
tcagagagggctctgcggaagctctgtggtgctgctactggggaggtggacctgttgccc
atgcctggccccaatgccaactggacagcggggctctcggtacactacagccaggacagc
agcctcatctactggttcaatggcacacaagctgtgcaagttcccctgggtggtccagca
gggctgggctctgggccgcaggatggcctcagtgaccactttaccctgtctttctggatg
aagcatagtgtgactcctagcaaggggaagaaggaggaggagaccattgtatgtaacacc
attcagaacgaggacggctactctcactactcattgactgtccacggctgcagaatcgcc
tttctctactggccgttgcttgagagtgcacgcccggtcaagttcctctggaagctggag
caggtatgtgacgatgagtggcatcactacgccctgaacctcgagttccccacagtcacg
ctctatactgatggcatctccttcgacccagctctcatccacgacaatggtctcatccac
ccacccaggagggaacctgcgctcatgatcggggcctgctggtctgaagagaagaacaaa
gagaaggagaaggggggagagaacagtacagacacgacctcaggagaccccttgccgatc
caccattacttccatggctacctagctggtttcagcgtgcgctcaggtcgcctggagagc
cgtgaggtcatcgagtgcctctatgcatgtcgggaggggctggactatagggatttcgag
agcctgggcaaaggcatgaaggtgcacgtgaacccctcgcagtccctgctcaccttggag
ggggatgatgtggagaccttcaaccatgccctgcagcacgtggcttacatgaacactctg
cgctttgccacgcccggcgtcaggccccttcgcctcaccaccgctgtcaagtgctttagt
gaagagtcctgtgtctccatccctgaagtggagggctatgtggtggttcttcagcccgat
gccccccagatccttctgagtggcacagctcattttgcccgcccagctgtggactttgag
ggacccgagggagtccccttgttccctgatcttcagatcacctgctccatttctcaccag
gtggaggccaaagcagatgagagttggcagggcacagtgacagacacacgcatgtcagat
gagattgtacacaacttggacggctgtgagatttctctggtgggggatgacctagaccct
gaacgagagagcctgctcttggacatggcttccctgcagcagcgaggcctggaactcacc
aacagatctgcctacctcaccattgctggggtggagaccatcactgtgtatgaagagatc
ctgaggcaggctcgttatcagcttcggcatggagctgccctttatgccaggaaattccgg
ctttcttgctcggagatgaacggccgatactccagcaacgaattcattgtggaggtcaac
gtcctgcacagcatgaaccgggtggcccatcccagccacgtgctcagttcacagcagttc
ctgcaccggggtcaccagcctcctcctgagatggctggacacagcctggccagctcccac
cggaactccatggtccccagtgctgcgactctcatcattgtggtatgcgtgggctttctg
gtgcttatggtcatcctcggcctcgtgcggatccactcccttcatcgccgtgtctcagga
actggtggaccctcaggggcttccgctgacccgaaagaccctgacctcttctgggatgac
tctgctctcaccattatcgtgaatcccatggagtcctaccagaaccagcagactggtgtg
gcaggggttgctggtggccagcaagaggaagaggacagcagtgattccgaagcagctgac
tcccccagcagcgatgaaagacgcatcattgagagccccccacaccgctattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system