KEGG   Rattus norvegicus (rat): 171394
Entry
171394            CDS       T01003                                 
Symbol
Clstn2
Name
(RefSeq) calsyntenin-2 precursor
  KO
K22660  calsyntenin 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    171394 (Clstn2)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Cadherin related
   171394 (Clstn2)
SSDB
Motif
Pfam: CLSTN_C Cadherin TMEM127 Laminin_G_3 Glyco_hydro_16
Other DBs
NCBI-GeneID: 171394
NCBI-ProteinID: NP_599204
RGD: 621151
Ensembl: ENSRNOG00000043085
UniProt: Q8VDA1
Position
8:complement(106899894..107516402)
AA seq 965 aa
MLPGRLCLVPLLLALGVGSGGGSGDGGDSRRRRLLAAKVNKHKPWIETSYHGVITENNDT
VILDPPLVALDKDAPVPFAGEICAFKIHGQELPFEAVVLNKTSGEGRLRAKSPIDCELQK
EYTFIIQAYDCGAGPQEAAWKKSHKAVVHIQVKDVNEFAPTFKEPAYKAIVTEGKIYDSI
LQVEAIDEDCSPQYSQICNYEIVTTDVPFAIDRNGNIRNTEKLSYDKQRQYEILVTAYDC
GQKPAAQDTLVQVDVKPVCKPGWQDWTKRIEYQPGSGSMPLFPGIHLETCDGAVSSLQVT
AELQTNYIGKGCDRETYSEKSLQKLCGASSGIIDLLPSPSAATNWTAGLLVDSSEMIFKF
DGRQGAKIPDGIVPKNLTDQFTITMWMKHGPSPGVRAEKETILCNSDKTEMNRHHYALYV
HNCRLVFLLRKDFDQADTFRPAEFHWKLDQICDKEWHYYVINVEFPVVTLYMDGATYEPY
LVTNDWPIHPSHIAMQLTVGACWQGGEVAKPRFAQFFHGSLASLTIRPGKMESQKVISCL
QACKEGLDINSLESLGRGIKYHFNPSQSILVMEGDDIGNINQALQKVSYINSRQFPTAGV
RRLRLSSKVQCFGEDVCISIPDVDAYIMVLQAIEPQITLQGTERFWRPAAQFESARGVTL
FPDIKIISTFAKTEASGDLRATGTAPKSAVLEEMLHNLDFCDILVLGGDLDPRQECLELN
HSELHQRHLDATNSTAGYSIYGVGSMSRYEQVLHHLRYRNWHPTSLETRRFQIKCSELNG
RYTSNEFNLEVSVLHEVRVSDTEHVNHLIVQPPFLQSVYHPETRSSIQRSSVVPSIATVV
IIISVCMLVFVVAMGVYRVRIAHQHFIQETEAAKEAEMDWDDSALTITVNPMEKHEGPGH
GEDETEGEEEEEAEEGMSSSSSGSDDSEEEEEEGMGRVRHGQSGTSSQRPERSTWNTAGV
INIWK
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgctgccggggaggctgtgcttggtgccgctcctgctggcgctgggcgtagggagcggc
ggaggcagcggcgacggcggggacagccggcggcgccgcctcctcgcggcgaaagtcaat
aaacacaagccatggatcgagacatcgtatcatggagtcataactgagaacaatgacaca
gtcatcttggaccctcctctcgtagccctggacaaagacgccccagtgccatttgcaggg
gaaatctgcgcattcaagatccatgggcaggagctgccttttgaagctgtggtgctcaat
aagacatctggagagggccggctccgtgccaagagtcccatcgactgtgagctacagaag
gagtacacattcatcatccaggcctatgactgtggtgcaggacctcaggaagcagcctgg
aagaagtcacacaaggctgtggtccacatccaggtgaaggatgtcaatgagttcgcaccc
accttcaaagaaccagcctacaaagccatcgtcacagagggcaagatctatgacagcatc
ctgcaggtagaagccatcgatgaggactgctccccccaatacagccagatttgcaactat
gaaattgtcacgacggatgtgccttttgccattgacagaaatggcaacatcagaaacact
gagaagctgagctatgacaagcaacgccagtatgagatcctggtaactgcttatgactgt
ggacagaagcccgctgctcaggacaccctggtccaggtggatgtgaagccagtgtgtaag
cctggctggcaagattggaccaaaaggattgagtaccagcccggctcagggagtatgccc
ttgttccccggcatccacctggagacgtgcgacggagctgtgtcctccctccaggtcact
gcagagctgcagactaattacatcggcaagggctgtgaccgagagacctactctgagaaa
tcccttcagaaactatgtggagcatcctcgggcatcatcgacctcttgccatcccctagt
gcggctaccaactggactgctggactcctggtggacagcagtgagatgatcttcaagttt
gatggcaggcagggtgccaagatcccagatgggattgtgcccaagaacctgacagaccag
ttcaccatcacaatgtggatgaaacatggccccagccctggcgtgagagctgagaaggaa
accatcctctgtaactcagataaaactgaaatgaaccggcatcactatgccttgtatgtg
cacaactgccgccttgtcttcctcctgcggaaggactttgaccaggcagacacctttcgc
cccgcagagtttcactggaagctggaccagatttgtgacaaagagtggcattactatgtc
atcaatgtggagttccctgtggtcaccttgtacatggatggagcaacatatgaaccatac
ctggtgaccaatgactggcccattcatccatctcacatagccatgcaactcactgtcggc
gcctgttggcaaggaggtgaagtggccaaaccacggtttgcacaatttttccatggcagc
cttgccagtctcacaatccgtcctggcaaaatggaaagccagaaggtgatttcttgtttg
caggcctgcaaagaagggctggatattaattccttggaaagccttggccgagggataaag
tatcacttcaacccttcacagtccatccttgtgatggaaggcgatgacattgggaacatc
aaccaagccctccagaaagtctcctacatcaactccaggcagttcccaacagcaggggtc
cggcgcctcagactctcttctaaagtccagtgctttggggaagacgtgtgcatcagcatc
ccagatgtggatgcctacatcatggtcctgcaggccatcgagccccagatcaccctccag
ggaacagagcgtttctggagacctgctgcccagttcgaaagtgccagaggagtgactctc
ttccctgacatcaagatcatcagcacctttgccaagactgaggcctctggggacttgaga
gctacaggcacagcccccaaatcggcagtcttggaagaaatgctacataatttggatttc
tgtgatattttggtgcttggaggggacttggatccaagacaagagtgcttggagctcaac
cacagtgagctccaccaacgacaccttgatgccaccaactctactgctggctactctatc
tatggtgtggggtccatgagccgttatgagcaggtactgcaccacctccgttaccgcaac
tggcaccccacttcccttgagactcggaggttccagatcaagtgttcagagctcaatggg
cgttacaccagcaatgagttcaacttagaggtcagtgtcctccatgaagttagagtctct
gatacggaacatgtcaaccatcttattgtgcagccacccttcctccagtctgtctatcac
cctgagacccggagtagtatccagcgcagttcagtggtcccgagcatcgccactgtggtc
atcattatctctgtgtgcatgctagtgtttgttgtggccatgggtgtgtaccgagtccga
attgcccaccagcattttatccaagagactgaggctgccaaggaggctgaaatggattgg
gatgactctgcactgactatcacagtcaaccctatggagaaacatgaaggaccagggcat
ggagaagacgagactgaaggagaggaagaagaagaagcagaggaaggcatgagctccagc
agcagtggctctgatgacagtgaagaggaagaagaggaagggatgggcagagtcagacat
gggcagagtggcaccagctctcaacgccctgaaagaagtacctggaatacagcaggagtc
ataaacatttggaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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