KEGG   Rattus norvegicus (rat): 171415
Entry
171415            CDS       T01003                                 
Symbol
Atg3
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG3
  KO
K08343  ubiquitin-like-conjugating enzyme ATG3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04136  Autophagy - other
rno04140  Autophagy - animal
rno05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    171415 (Atg3)
   04136 Autophagy - other
    171415 (Atg3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    171415 (Atg3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    171415 (Atg3)
   04121 Ubiquitin system [BR:rno04121]
    171415 (Atg3)
   03029 Mitochondrial biogenesis [BR:rno03029]
    171415 (Atg3)
Membrane trafficking [BR:rno04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    171415 (Atg3)
Ubiquitin system [BR:rno04121]
 Ubiquitin-conjugating enzymes (E2)
  UBL-conjugating enzymes
   171415 (Atg3)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    171415 (Atg3)
SSDB
Motif
Pfam: Autophagy_act_C Med13_N
Other DBs
NCBI-GeneID: 171415
NCBI-ProteinID: NP_599221
RGD: 708464
Ensembl: ENSRNOG00000002094
UniProt: Q6AZ50
Position
11:complement(69130948..69159280)
AA seq 314 aa
MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEE
LKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDDGDGGWVDTYHNTGITGIT
EAVKEITLESKDSIKLQDCSVLCDEEEEEEEGEAADMEEYEESGLLETDEATLDTRRIVE
ACKAKADAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDH
VKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAV
IPTIEYDYTRHFTM
NT seq 945 nt   +upstreamnt  +downstreamnt
atgcagaatgtgatcaacacggtgaagggaaaggctctggaagtggccgagtacctgacc
ccggtcctcaaggaatcaaaatttaaggaaacaggtgtaatcaccccagaagagtttgtg
gcagctggagatcacttagtccaccactgtccaacatggcaatgggctacaggggaagaa
ttgaaagtgaaggcatatctaccaacagggaaacagtttttggtaaccaaaaatgttcca
tgctacaagcggtgtaaacagatggagtattcggatgaattggaggctatcattgaagaa
gatgatggtgatgggggctgggtagacacgtaccataacacaggtattacaggaattact
gaagcagttaaggagattacactggaaagcaaggacagtataaaactccaagactgctca
gtgctgtgcgatgaagaggaggaggaagaggaaggggaagctgcagacatggaagaatat
gaagagagtggattgttggaaacagatgaggctaccctagacaccagaagaatagtggaa
gcttgtaaagctaaagctgatgctgggggtgaagacgccattctgcaaacaagaacctat
gacctgtacatcacttacgacaagtactaccagacgccacggctctggctgtttggctat
gatgagcaacggcagcctttaacagttgagcacatgtatgaagacatcagtcaagatcat
gtgaagaaaacagtgaccattgaaaaccatcctcacctcccaccacctcctatgtgttca
gttcacccctgcaggcatgctgaagtgatgaagaaaattattgagaccgttgcagaaggc
gggggagagcttggtgttcatatgtatcttttaatttttttgaaatttgttcaagctgtc
attccaacaatagaatatgactacacaagacacttcacaatgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system