KEGG   Rattus norvegicus (rat): 171495
Entry
171495            CDS       T01003                                 
Symbol
Capn5
Name
(RefSeq) calpain-5
  KO
K08574  calpain-5 [EC:3.4.22.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    171495 (Capn5)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C2: calpain family
   171495 (Capn5)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III C2
Other DBs
NCBI-GeneID: 171495
NCBI-ProteinID: NP_604456
RGD: 620084
Ensembl: ENSRNOG00000014251
UniProt: A6I6C6 A0A0G2JYD8
Position
1:complement(161827474..161884142)
AA seq 640 aa
MFSCTKAYEDQNYSALKRACLRRKVLFEDPHFPATDDSLYYKGTPGPTVRWKRPKDICDD
PRLFVDGISSHDLHQGQVGNCWFVAACSSLASRESLWQKVIPDWKEQEWNPEKPDSYAGI
FHFNFWRFGEWVDVVVDDRLPTVNNQLIYCHSNSKNEFWCALVEKAYAKLAGCYQALDGG
NTADALVDFTGGVSEPIDLTEGDLATDEAKRSQLFERVLKVHSRGGLISASIKAMTAADM
ETRLACGLVKGHAYAVTDVRKVRLGHGLLAFFKSEKLDMIRLRNPWGEREWTGPWSDTSE
EWQKVSKSEREKMGVTVQDDGEFWMTFEDMCRYFTDIIKCRLINTSYLSIHKTWEEARLR
GAWTRHEDPQQNRSGGCINHKDTFFQNPQYIFEVKKPEDEVLICIQQRPKRSTRREGKGE
NLAIGFDIYKVEENRQYRMHSLQHKAASSIYINSRSVFLRTELPEGRYVIIPTTFEPGHT
GEFLLRVFTDVPSNCRELRLDEPPRTCWSSLCGYPQQVTQVHVLGAAGLKDSSTGANSYV
IIKCEGEKVRSAVQRGTSTPEYNVKGIFYRKKLSQPITVQVWNHRVLKDEFLGQVHLKTA
PDDLQDLHSLHLQDRSGRQPSDLPGIVAVRVLCSASLTAV
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgttctcctgcacaaaggcctatgaagaccagaattactcagctctgaagcgggcctgt
ctgcgcaggaaggtgctgttcgaggacccccacttccctgccaccgacgactcactctac
tataagggtaccccagggcccacagtcaggtggaagcggcctaaggatatctgcgatgat
ccccggctcttcgtcgatggcatcagctcgcatgacctgcaccagggccaggtgggcaac
tgctggtttgtggccgcctgctcatcactcgcctcccgggagtcactctggcaaaaggtc
atcccagactggaaggagcaggaatggaaccccgagaagcccgacagctatgctggcatc
ttccatttcaacttctggcgctttggggagtgggtggacgtggtcgtcgatgaccggctg
cccacagtcaacaaccaactcatttactgccactccaactcgaaaaatgagttctggtgt
gccctggtggagaaggcctatgccaagctggcaggctgttaccaggccctggacggaggc
aacacagccgatgcactggtggatttcacaggcggtgtttcggaacccatcgacctgacc
gagggggacttggccacagatgaggctaagagaagccagctctttgaacgtgtgttgaag
gtgcacagcagaggtgggctcatcagtgcctccatcaaggctatgacagcagctgacatg
gagacccgtctggcctgtggtctggtgaagggccatgcatatgctgtcaccgatgtgcgc
aaggtgcgcctgggccatggcctgctggccttcttcaagtcagagaagctggacatgatc
cgtctgaggaacccctggggcgagcgggagtggaccgggccctggagtgacacgtcagag
gaatggcagaaagtgagcaagagtgagagggagaaaatgggcgtgaccgtacaggacgat
ggtgaattctggatgacctttgaggacatgtgccgatacttcaccgacatcattaagtgc
cgcctgattaatacgtcctacctgagcatccacaagacatgggaggaggcccggctgcgt
ggtgcctggacgagacatgaggacccccagcagaaccgcagtggaggctgcatcaaccac
aaggacactttcttccagaacccacagtacatatttgaagtcaagaagccagaagatgaa
gtgctgatctgcatccagcagcggcccaaacgctcgactcgccgagagggcaaaggggag
aatctggccatcggcttcgacatctataaggtggaagagaaccgccagtaccggatgcac
agcctgcagcataaggccgccagctccatctacatcaattctcggagtgttttcctgcgg
acagagctgcctgagggccgctacgtcatcatccctaccacctttgagccaggccacact
ggcgagttcctgctccgcgtcttcacagacgttccctccaactgccgggagctacgcctg
gatgagccccctcgtacctgctggagctccctgtgtggctaccctcagcaggtgacccag
gtccatgtcctgggagctgctggcctcaaggactcttccacaggagcaaactcatatgtg
atcatcaagtgtgagggtgaaaaggttcgctcagctgtgcagagagggacctcgacgcca
gagtacaatgtgaaaggcatcttctatcgcaagaaactgtctcagcccatcactgtgcag
gtctggaatcaccgagtcctgaaggatgaattcctgggccaggtgcacctgaagactgcc
ccggatgacctgcaggacctgcacagcctccatctccaggaccgcagtggccggcagccc
agcgacttgccaggcatcgtcgctgtgcgtgtcctctgcagtgcctctctcacggctgtc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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