KEGG   Rattus norvegicus (rat): 171501
Entry
171501            CDS       T01003                                 
Symbol
Rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    171501 (Rnf38)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     171501 (Rnf38)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    171501 (Rnf38)
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-ANAPC11 zf-RING-like
Other DBs
NCBI-GeneID: 171501
NCBI-ProteinID: NP_604462
RGD: 621856
Ensembl: ENSRNOG00000013956
UniProt: Q8R4E3
Position
5:complement(63154507..63263138)
AA seq 623 aa
MSGSAAAAVAVAAATSAAAAAAAHFQPRPSSPRPGPAEIGPPRRPRPPPPPPPPRPEPIT
AGRLSPPGHGSLRSGAQGVGACGRAPGAGSVGASFQCQSIHHDHICHDDSDKISPGANSA
PLPGHPNKVICERVRLPSLFPLLPSDQDTTIQEDAHFKAFFQSEDSPSPKRQRLSHSVFD
YTSASPAPSPPMRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERL
SRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLH
QGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACS
VQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEV
ELLGEHLQVGSFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSR
YRSQQPVPPPTYHPSLLPYVLSMLPVPPTVGPTFSFELDVEDGEVENYEALLNLAERLGE
AKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK
WLKGNRTCPICRADASEVHRDSE
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgagcggaagcgccgccgccgcggtcgcggtcgccgccgccacctcagccgccgccgcc
gccgccgcgcacttccagcctcggccgtcgtctcccaggccggggcccgccgagatcggg
cccccgcgccgcccgcgccccccgccgccgccgccgccgccccggcccgagcccatcacc
gccggccgccttagccctccgggccacgggtctcttcggagcggggcgcagggtgtcggt
gcctgcggcagagcgcccggagcaggtagtgttggtgcttcttttcagtgccagtccatc
catcacgaccacatttgtcatgatgacagtgacaagatatctcccggggcaaattcagca
cctctacctggccatcctaacaaggtgatttgtgaaagggtgagacttccgagcctgttc
cctctcctcccaagtgatcaggacactaccattcaagaggatgctcacttcaaagctttc
ttccagagtgaagatagtccaagtcctaagagacagcgcctctctcattcagtctttgat
tatacatcagcatcaccagctccctcaccaccaatgcgaccatgggagatgacatcaaat
aggcagcccccttcagttcgaccaaatcagcatcacttctcaggggaacgatgtaacaca
cctgcacgcaacaggagaagtcctcctgttaggcgtcagcgaggaagaagggaacgtctg
tctcgacataattccattagtcaagatgaaaactatcaccatctcccttatgcacaacag
caagcaatagaggaacctcgagccttccaccctccgaatgtatctccccgtctgttacat
ccagctgctcatccaccccagcagaatgcagtcatggttgacatacatgaccagctccat
caaggaacagttcctgtctcctacactgtaaccacagtggcgccccatgggattcctctc
tgcacaggccagcacatccctgcttgcagtacacaacaggtcccaggatgctctgttgtt
ttcagtggacagcacctccctgtctgtagtgtgcctcctccaatgcttcaggcatgttca
gttcagcacttgccagtaccatatgctgcgttcccacccctcatttctagtgatccgttt
cttctacatcctcctcatctttctccccatcatcctcctcacttgccaccaccaggccag
tttgtccctttccaaacacagcagtcacgatcgcctctgcagaggatagaaaatgaagtg
gagctcttaggagaacatcttcaagtaggcagtttcacttatcccccttcggcccacccc
ccaacattacctccgtcagctcctttgcagttcctgacacatgaccctttgcatcaggag
gtgtcctttggagtaccttatccaccatttatgcctcggagactcacaggacgtagcaga
taccgatcccagcagccagtgccccctcctacctaccatcccagcttactgccatatgtg
ttatcaatgcttccagtgccacctacagtcggcccaaccttcagctttgaattggatgtg
gaagatggagaagttgaaaattacgaagccctgttaaacctggcagagagactgggagag
gcgaaacctcggggactgactaaagcggatattgaacagctcccttcttacaggttcaac
cctagcaaccaccagtcagagcagactttgtgtgtagtatgcatgtgtgattttgagtca
aggcagcttcttagagtcttaccctgtaaccacgagttccatgccaagtgtgttgataaa
tggcttaagggaaatcgtacttgcccaatttgccgagctgatgcttctgaagtgcaccgg
gattcagagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (25)   
   UniProt (1)   
   RefSeq(pep) (24)   
DNA sequence (28)   
   RefSeq(nuc) (24)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (76)   

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