KEGG   Rattus norvegicus (rat): 171552
Entry
171552            CDS       T01003                                 
Symbol
Prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18
  KO
K12817  pre-mRNA-splicing factor 18
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    171552 (Prpf18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    171552 (Prpf18)
Spliceosome [BR:rno03041]
 Complex C
  Other components
   Step II factors
    171552 (Prpf18)
SSDB
Motif
Pfam: Prp18 PRP4
Other DBs
NCBI-GeneID: 171552
NCBI-ProteinID: NP_612532
RGD: 708550
Ensembl: ENSRNOG00000018396
UniProt: Q9JKB8 A6JM01
Position
17:78539004..78570483
AA seq 342 aa
MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKVQPKEDDQKPLT
SSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPMRLFGETDYDAFQRLRKIEILTPEVN
KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD
DHKDMDIITKFLKFLLGVWAKELNSREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR
NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK
HVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggacatcctgaagtcagagattctgcggaagcggcagctggtggaggacaggaacctg
ctggtggaaaataaaaagtacttcaagcggagtgaacttgcaaaaaaggaagaggaagct
tattttgaaagatgtggctacaaggtacagccaaaagaggatgaccagaaaccactaacg
tcatcaaatccagtgctggaacttgaactagcagaggaaaagcttcctatgactctttct
aggcaagaggtcatcagaagactgagagagagaggagagccaatgaggctgtttggggaa
actgactatgatgctttccagcgtttaagaaaaatagagattctcacaccagaagttaac
aagggcttaaggaatgacctaaaagcggctctggacaagattgaccagcagtacttgaat
gaaatcgtgggtggtcaggaacctggagaggaggacacacagaatgatctgaaggttcac
gaggaaaacaccaccattgaggagttagaggcactgggggagtccttagggaaaggtgac
gatcacaaggacatggacatcatcaccaagttcctgaagtttcttcttggtgtttgggct
aaagaattgaattccagagaggattacgtgaaacgcagcgtgcagggcaaactgaacagt
gctacccagaagcagaccgagtcctacctcagaccacttttcagaaagctccggaaaagg
aatcttcctgctgatattaaagaatcaataacagatattattaagttcatgctacagaga
gagtacgtgaaggcgaatgacgcttaccttcagatggccattggcaatgctccctggcct
attggtgtcactatggtcggcatccacgccagaactggcagggaaaagattttttccaag
catgttgcccatgtcttaaatgatgaaacccaacgaaaatacattcagggactgaagagg
ttaatgacaatctgccagaagcactttcctacagacccgtccaagtgtgtggagtacaat
gcactgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (15)   
   RefSeq(nuc) (9)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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