KEGG   Rattus norvegicus (rat): 191573
Entry
191573            CDS       T01003                                 
Symbol
Grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A isoform 1 precursor
  KO
K05213  glutamate receptor ionotropic, NMDA 3A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04020  Calcium signaling pathway
rno04024  cAMP signaling pathway
rno04080  Neuroactive ligand-receptor interaction
rno04724  Glutamatergic synapse
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05030  Cocaine addiction
rno05031  Amphetamine addiction
rno05033  Nicotine addiction
rno05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    191573 (Grin3a)
   04024 cAMP signaling pathway
    191573 (Grin3a)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    191573 (Grin3a)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    191573 (Grin3a)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    191573 (Grin3a)
   05020 Prion disease
    191573 (Grin3a)
  09165 Substance dependence
   05030 Cocaine addiction
    191573 (Grin3a)
   05031 Amphetamine addiction
    191573 (Grin3a)
   05033 Nicotine addiction
    191573 (Grin3a)
   05034 Alcoholism
    191573 (Grin3a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    191573 (Grin3a)
Ion channels [BR:rno04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   191573 (Grin3a)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor
Other DBs
NCBI-GeneID: 191573
NCBI-ProteinID: NP_612555
RGD: 621704
Ensembl: ENSRNOG00000005723
UniProt: Q9R1M7 A6KJD3
Structure
Position
5:complement(68802333..69001880)
AA seq 1135 aa
MRRLSLWWLLSRVCLLLPPPCALVLAGVPSSSSHPQPCQILKRIGHAVRVGAVHLQPWTT
APRAASRAQEGGRAGAQRDDPESGTWRPPAPSQGARWLGSALHGRGPPGSRKLGEGAGAE
TLWPRDALLFAVENLNRVEGLLPYNLSLEVVMAIEAGLGDLPLMPFSSPSSPWSSDPFSF
LQSVCHTVVVQGVSALLAFPQSQGEMMELDLVSSVLHIPVLSIVRHEFPRESQNPLHLQL
SLENSLSSDADVTVSILTMNNWYNFSLLLCQEDWNITDFLLLTENNSKFHLESVINITAN
LSSTKDLLSFLQVQMDNIRNSTPTMVMFGCDMDSIRQIFEMSTQFGLSPPELHWVLGDSQ
NVEELRTEGLPLGLIAHGKTTQSVFEYYVQDAMELVARAVATATMIQPELALLPSTMNCM
DVKTTNLTSGQYLSRFLANTTFRGLSGSIKVKGSTIISSENNFFIWNLQHDPMGKPMWTR
LGSWQGGRIVMDSGIWPEQAQRHKTHFQHPNKLHLRVVTLIEHPFVFTREVDDEGLCPAG
QLCLDPMTNDSSMLDRLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIV
GDGKYGAWKNGHWTGLVGDLLSGTANMAVTSFSINTARSQVIDFTSPFFSTSLGILVRTR
DTAAPIGAFMWPLHWTMWLGIFVALHITAIFLTLYEWKSPFGMTPKGRNRNKVFSFSSAL
NVCYALLFGRTAAIKPPKCWTGRFLMNLWAIFCMFCLSTYTANLAAVMVGEKIYEELSGI
HDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEMHEYMRRYNVPATPDGVQYLKNDPEKLD
AFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPPNSPLTSNISELISQYKSHGFM
DVLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVLLCIGFGLSILTTIGEHIVHRLLL
PRIKNKSKLQYWLHTSQRFHRALNTSFVEEKQPRSKTKRVEKSRWRRWTCKTEGDSELSL
FPRSNLGPQQLMVWNTSNLSHDNQRKYIFNDEEGQNQLGTQAHQDIPLPQRRRELPASLT
TNGKADSLNVTRSSVIQELSELEKQIQVIRQELQLAVSRKTELEEYQKTNRTCES
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgaggagactgagtttgtggtggctgctgagcagggtctgtctgctgctgccgccgccc
tgcgcactggtgctggccggggtgcccagctcctcctcgcacccgcaaccctgccagatc
ctcaagcgcatcggacacgcggtgagggtgggcgcggtgcacttgcaaccctggaccacg
gccccacgcgcagccagtcgcgctcaggaaggcggcagggcgggtgcccagagggatgat
ccagagtccgggacgtggcggccaccggcgccctcgcaaggcgcacgctggttggggagc
gccctgcatggccggggtccacccggctcccgaaagctcggggagggcgcgggggccgag
accctgtggccgcgggatgccctactgttcgctgtggaaaacttgaaccgtgtggaaggg
ctcctaccctacaacctgtctttggaagtagtgatggccattgaggcgggcctgggcgat
ctgccgcttatgcccttctcttccccaagctcaccgtggagcagtgaccctttctccttt
ctgcagagcgtgtgccacaccgtagtggtacaaggggtgtcggcgctgctggccttcccc
cagagccagggcgaaatgatggagctggacttggtcagctctgtcctgcacatcccagtg
ctcagcatagtgcgccacgagtttccgcgggagagtcagaatcccctgcacctacagctg
agtttagaaaactcactaagttctgatgctgatgtcactgtctcaatcctgaccatgaac
aactggtacaattttagcttgttgctctgccaggaagactggaatatcacggacttcctc
ctccttacggagaataactccaagttccacctcgagtctgttatcaacatcactgctaat
ctgtcctccacaaaggaccttctaagtttcctgcaggtccagatggacaacattaggaac
agcacacccacaatggtgatgtttggctgtgacatggacagtatccggcagatatttgaa
atgtccacacagtttgggctatcacctcctgaacttcactgggttttaggagactcccag
aatgtggaggaactgaggacagaaggcctgcccttagggctcattgctcatggaaaaacc
acacaatctgtctttgagtactacgttcaggatgccatggagttggttgcaagagctgta
gccacagccaccatgatccagccagagcttgctctccttcccagcacaatgaactgcatg
gatgtgaaaaccacaaatctcacttctggacagtatttatcaaggtttttagccaacacc
actttcagaggtctcagtggttccatcaaagtaaagggctccaccatcatcagctcagag
aacaactttttcatctggaacttgcagcacgaccctatgggaaagccaatgtggactcgc
ctgggcagctggcaaggaggaaggatagtcatggactctggaatatggccagagcaggcc
cagaggcacaaaacccacttccagcacccaaacaagttacacttgagagtggtgacattg
attgaacacccatttgttttcacgagagaagtagacgatgaaggcttatgccctgctgga
cagctctgtctagaccctatgactaacgactcttccatgctggatcgtctgtttagcagc
ctgcatagcagtaatgacacagtgccaatcaagttcaagaagtgctgttatgggtactgc
atcgatctcctggagcagctagcagaagacatgaactttgactttgacctctacattgta
ggggatggaaagtacggagcttggaaaaatggtcactggactgggctggttggtgatctc
ctgagtgggacagccaacatggcggtcacttctttcagcatcaataccgcacgaagccag
gtgatagatttcaccagccctttcttctcaaccagtttggggatcttagtgaggactcga
gacacagcagctccaattggagccttcatgtggccactccactggaccatgtggctggga
attttcgtggctctccatatcactgccatttttctcactctgtatgaatggaagagcccc
tttggtatgacccctaaggggaggaacagaaacaaagtcttctccttctcctcagctttg
aatgtctgctatgcccttctgtttggcagaacagcagccatcaaacccccaaaatgctgg
actggaaggtttctgatgaatctttgggccattttctgtatgttttgcctttctacatac
acagcgaacttggctgctgtcatggtaggtgagaagatctatgaagagctttctggaatt
catgaccctaagcttcatcatccttctcaaggcttccgctttggaactgtccgggaaagc
agtgctgaagactatgtgcgccagagcttcccagagatgcatgagtacatgagaaggtac
aacgtgccagccacccctgatggagtgcagtatctgaagaatgatccagagaaactagac
gccttcatcatggacaaagcccttctggattatgaagtgtcaatagatgctgactgcaag
cttctgaccgtaggaaagccatttgccatcgaaggatatggcattggtctccctccaaac
tctccattgacctctaatatatctgagctcatcagtcagtacaagtctcacgggtttatg
gatgtgctccatgacaagtggtacaaggtggttccctgcggaaagagaagctttgccgtc
actgagactttgcaaatgggcatcaagcacttctctggactcttcgtgctgttgtgcata
ggatttggtctctccatcctgaccaccattggtgaacacatagtgcacagactgctgtta
ccacgcatcaaaaacaaatccaagctgcagtactggctgcacacgagtcagaggtttcac
agagcattaaacacgtcattcgtagaagaaaagcagccacgttccaagacaaaacgtgtg
gagaagagcagatggagaagatggacctgcaagacagaaggggactctgaattgtctctg
tttcctaggtccaacctgggaccccagcagctcatggtatggaatacttccaatctgagt
catgacaaccaacgaaaatacatctttaatgacgaggaaggacaaaaccagctgggtacc
caggcccaccaggacatccctctccctcagaggagaagagagctccctgcctcactgacc
accaatgggaaagcagactccctcaatgtaactcggagctccgtgattcaggaactctct
gagttggagaagcagatccaagtgatccgccaggagctgcagttggctgtaagcaggaag
acagagctggaggagtatcaaaagacaaatcggacttgtgaatcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
3D Structure (4)   
   PDB (4)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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