KEGG   Rattus norvegicus (rat): 192117
Entry
192117            CDS       T01003                                 
Symbol
Syngap1
Name
(RefSeq) ras/Rap GTPase-activating protein SynGAP isoform 2
  KO
K17631  Ras/Rap GTPase-activating protein SynGAP
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04014  Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    192117 (Syngap1)
SSDB
Motif
Pfam: DAB2P_C RasGAP C2 PH Exonuc_VII_L PH_6
Other DBs
NCBI-GeneID: 192117
NCBI-ProteinID: NP_001106880
RGD: 621090
Ensembl: ENSRNOG00000000483
Vega: OTTRNOG00000001955
Position
20:5028226..5058519
AA seq 1249 aa
MGLRPPTPTPSGGSGSGSLPPPSHRQPLRRRCSSCCFPGEYHLGRSRRKSVPGGKQYSME
AAPAAPFRPSQGFLSRRLKSSIKRTKSQPKLDRTSSFRQILPRFRSADHDRARLMQSFKE
SHSHESLLSPSSAAEALELNLDEDSIIKPVHSSILGQEFCFEVTTSSGTKCFACRSAAER
DKWIENLQRAVKPNKDNSRRVDNVLKLWIIEARELPPKKRYYCELCLDDMLYARTTSKPR
SASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFT
EQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMSILPMELYKE
FAEYVTNHYRMLCAVLEPALNVKGKEEVASALVHILQSTGKAKDFLSDMAMSEVDRFMER
EHLIFRENTLATKAIEEYMRLIGQKYLKDAIGEFIRALYESEENCEVDPIKCTASSLAEH
QANLRMCCELALCKVVNSHCVFPGELKEVFASWRLRCAERGREDIADRLISASLFLRFLC
PAIMSPSLFGLMQEYPDEQTSRTLTLIAKVIQNLANFSKFTSKEDFLGFMNEFLELEWGS
MQQFLYEISNLDTLTNSSSFEGYIDLGRELSTLHALLWEVLPQLSKEALLKLGPLPRLLS
DISTALRNPNIQRQPSRQSERARSQPMVLRGPSAEMQGYMMRDLNSSIDLQSFMARGLNS
SMDMARLPSPTKEKPPPPPPGGGKDLFYVSRPPLARSSPAYCTSSSDITEPEQKMLSVNK
SVSMLDLQGDGPGGRLNSSSVSNLAAVGDLLHSSQASLTAALGLRPAPAGRLSQGSGSSI
TAAGMRLSQMGVTTDGVPAQQLRIPLSFQNPLFHMAADGPGPPAGHGGSSGHGPPSSHHH
HHHHHHHRGGEPPGDTFAPFHGYSKSEDLSTGVPKPPAASILHSHSYSDEFGPSGTDFTR
RQLSLQDNLQHMLSPPQITIGPQRPAPSGPGGGSGGGSGGGGGGQPPPLQRGKSQQLTVS
AAQKPRPSSGNLLQSPEPSYGPARPRQQSLSKEGSIGGSGGSGGGGGGGLKPSITKQHSQ
TPSTLNPTMPASERTVAWVSNMPHLSADIESAHIEREEYKLKEYSKSMDESRLDRVKEYE
EEIHSLKERLHMSNRKLEEYERRLLSQEEQTSKILMQYQARLEQSEKRLRQQQVEKDSQI
KSIIGRLMLVEEELRRDHPAMAEPLPEPKKRLLDAQRGSFPPWVQQTRV
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgggcttaaggccccccaccccgaccccgtcagggggctccggttcaggttccttgccc
cctccttcccaccgccagcctctccgccgccgctgctcttcctgctgctttccgggggaa
taccacttgggtcgctcgaggaggaagagtgtccccggggggaaacagtacagcatggaa
gccgcccccgctgcgcccttccggccctcgcaaggcttcctgagccggaggctaaaaagc
tccatcaaacgtacaaagtcacaacccaaacttgaccggaccagcagctttcgacagatc
ctgcctcgcttccgaagtgctgaccatgaccgggcccggctgatgcagagcttcaaggag
tctcactcccatgagtccctgctgagtcccagcagtgctgctgaggccctggagctcaac
ctggatgaagactccattatcaagccagtacacagctccatcctgggccaggagttctgc
tttgaggtaacaacatcgtctgggacaaaatgttttgcctgtcggtctgcagccgaaagg
gacaaatggattgagaatctacagagggctgtgaaacccaacaaggacaacagccgccgg
gtagataacgtgctgaaactatggatcatagaagctcgagagctgccccccaagaagcga
tattactgcgagttatgcctggacgacatgctctatgcacggaccacttccaagccccgc
tcagcctcaggagacactgtcttttggggcgagcacttcgagtttaacaacctgcctgct
gtccgggcgctgcggctgcatctgtaccgtgactcggacaaaaagcggaagaaggacaag
gcaggctacgttggcctggtgactgttccagtggccaccctggctgggcgccacttcaca
gagcagtggtaccccgtgaccctgccaacaggaagtgggggctctgggggtatgggctcg
gggggaggaggggggtcagggggcggctcagggggcaaagggaaaggaggctgtcctgct
gtgcggctgaaggcccgttaccagacaatgagtatcctgcccatggagctatataaggag
tttgcagaatatgtgaccaaccactaccgcatgctgtgtgccgtgctggagcccgccctc
aatgtcaagggcaaggaggaggtcgctagtgcactggttcacatcctgcaaagcacaggc
aaggccaaggacttcctttcagacatggccatgtcagaggtagaccggttcatggagcgg
gaacacctcatattccgcgagaacacgctcgccactaaagccatagaagagtatatgaga
ctgattggccagaaatacctcaaggatgccattggggagttcatccgggctctgtatgaa
tctgaggagaactgtgaagtagaccccatcaagtgcacagcgtccagtctggcagagcac
caggccaacctgcggatgtgctgtgagttggccctgtgcaaggtggtcaactcccattgc
gtgttcccgggggagctgaaggaggtgtttgcatcatggcggctgcgctgtgcagagcgg
ggccgggaggacattgctgacaggctgatcagcgcctcgctcttcctgcgcttcctctgc
ccggccatcatgtcgcccagtctgtttggactgatgcaggagtacccagatgagcagacc
tcacgaaccctcaccctcatcgccaaggttatccagaacctggccaacttttccaagttt
acctcaaaggaggacttcctgggcttcatgaacgagtttctggagctggagtggggttct
atgcagcaattcttgtatgagatatccaacctggacacactgaccaacagcagcagtttt
gagggctacatagacttgggccgcgagctctccacacttcacgccctgctctgggaggtg
ctgccccagctcagcaaggaagccctcctgaagctgggcccgctgccccggctcctcagc
gacatcagcacagccctgaggaaccctaacatccaaaggcagccgagccgccagagcgag
cgcgctcggtctcagcccatggtgctgcgcgggccgtcagccgagatgcagggctacatg
atgcgggacctcaacagctccatcgaccttcagtccttcatggctcgaggcctcaacagc
tctatggacatggctcgcctcccctccccaaccaaggagaaacccccgccgccccctccc
ggtgggggtaaagacctgttctatgtgagccggccaccactggcccggtcctccccagca
tactgcacgagcagctcggacatcacagagccggagcagaagatgctgagtgtcaacaag
agtgtgtccatgctggacctgcagggcgacgggcctgggggccgccttaacagcagtagt
gtttccaacctggcagctgttggggacctgttgcactcaagccaggcttcactgacagca
gccttggggttgcggcctgcacctgccgggcgcctctcccaagggagtggctcttccatc
acagcagccggcatgcgcctcagccagatgggtgtcactacggatggtgtccccgcccag
caactgcgcatccctctttccttccagaaccctctcttccatatggctgccgatggacca
gggcccccagcaggccatggagggagcagtggccatggtccaccttcctcccatcaccac
caccaccaccatcaccatcaccgagggggagaacccccaggggacacttttgccccgttc
catggctatagcaagagcgaggacctctctacaggggtccctaagccccctgcggcctcc
atccttcacagccacagctacagtgatgagtttggaccctctggtactgattttacccgt
cggcagctctcacttcaggacaacctacagcacatgctctccccgccccagatcaccatc
ggtccccagaggccagctccctcagggccaggagggggcagtggtgggggcagtggtggg
ggcggtgggggccagccacctcccttgcagaggggcaaatctcagcagttgacagtgagt
gctgcccagaaaccccggccgtccagcgggaacctattgcagtccccggaaccaagttat
ggtcctgcccgtccacggcaacagagcctcagcaaagagggcagcattgggggcagcggg
ggcagcggtggcggagggggtggggggctcaagccctccatcaccaagcagcattcccag
actccatccacgctgaaccccacgatgccggcctcggagcggactgtagcctgggtgtcc
aatatgcctcacctgtccgctgacatcgagagtgcacacattgagcgggaagagtacaag
ctgaaggagtactcgaagtccatggacgagagccgactggacagggtgaaggagtacgag
gaggagatccactcactgaaggaaaggctacacatgtccaaccggaagctggaagagtac
gagcggaggctgctgtcccaggaagagcagaccagcaagatcctgatgcagtaccaagcc
cgcctggagcagagcgagaagcgcttgaggcagcagcaggtggagaaggactcccagatc
aagagcatcattggcaggctgatgctggtggaggaggagctgcgccgggaccaccccgcc
atggctgagccgctgcctgaacccaagaagaggctgctcgacgctcagagaggcagcttc
cccccttgggtccaacaaacccgcgtgtga

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