KEGG   Rattus norvegicus (rat): 192129
Entry
192129            CDS       T01003                                 
Symbol
Vmp1
Name
(RefSeq) vacuole membrane protein 1
  KO
K21248  vacuole membrane protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    192129 (Vmp1)
SSDB
Motif
Pfam: SNARE_assoc DUF6709 DUF6766 COX6A MerE
Other DBs
NCBI-GeneID: 192129
NCBI-ProteinID: NP_620194
RGD: 70367
Ensembl: ENSRNOG00000003967
UniProt: Q91ZQ0 A6HHR4
Position
10:complement(71903223..72002337)
AA seq 406 aa
MAENGTNCDQRRGAMSKEQHNGSFTDPSSVNEKKRRDREERQNIVLWRQPLITLQYFSLE
TLVVLKEWTSKLWHRQSMVVSFFLLLAALVATYYVEGAHQQYVQRIEKQFLLYAYWIGLG
ILSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSVNFPEPPYPDQIICPDEEGTEGAISL
WSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQDF
ASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAIIK
MHIQKIFVIVTFSKHIVEQMVAFIGAVPGIGPSLQKPFQEYLEAQRQKLHHRSEAGTAQG
ENWLSWTFEKLVVAMVCYFILSIINSMAQSYAKRIQQRLNSEEKTK
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcagagaatggaacaaattgtgaccagagacgtggagcaatgagtaaggaacagcat
aatgggagtttcacagacccctcttcagtaaatgagaagaagagaagggatcgggaagaa
agacagaatatcgtcctgtggagacagccactcattaccttgcagtatttctctctggaa
actcttgtagttttgaaggaatggacctcaaaattgtggcatcgtcaaagcatggtggtg
tcctttttcctgctgcttgctgcgcttgtagctacgtattatgtggaaggagcgcaccag
cagtatgtgcagcggatagagaagcagtttcttttatatgcctactggataggcctgggg
attctgtcctctgttggtcttggaacaggattgcacacctttctgctttatctgggccca
catatagcttcagttacattagctgcttatgaatgcaattcggttaatttccctgagcca
ccctatcctgaccagattatctgcccagacgaagaaggcactgaaggagccatatctttg
tggagtatcatctcaaaagttagaattgaagcctgcatgtggggcattgggacagcaatt
ggggagctgcctccatatttcatggccagggcagctcgcctctcaggtgctgaaccagat
gatgaagagtatcaggaatttgaagaaatgctggaacacgcagagactgcacaagacttt
gcatcacgagctaaactggcagttcaaaaactagtacagaaagttggattttttggaatt
ttggcctgtgcttctattccaaatcccctgttcgacctggctggaataacatgtggacac
ttccttgtacctttttggaccttctttggtgcaaccctgattggaaaagcaatcattaaa
atgcatatccagaaaatctttgttatagtaactttcagcaaacacatcgtggagcagatg
gtggctttcattggggctgtacccggcataggtccgtctctgcagaagccttttcaggaa
tacctggaggcccagcggcagaagctccaccatagaagcgaagcaggcacagcgcaggga
gaaaactggttatcctggacgtttgagaagctggtcgttgccatggtgtgttactttatc
ctgtctatcattaactccatggcacaaagctatgccaaacgaatccagcagcgcttgaac
tcagaggagaagactaaataa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (17)   
   RefSeq(nuc) (3)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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