KEGG   Rattus norvegicus (rat): 192154
Entry
192154            CDS       T01003                                 
Symbol
Hip1
Name
(RefSeq) huntingtin-interacting protein 1 isoform 2
  KO
K04559  huntingtin interacting protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05016  Huntington disease
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    192154 (Hip1)
   05022 Pathways of neurodegeneration - multiple diseases
    192154 (Hip1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    192154 (Hip1)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    192154 (Hip1)
SSDB
Motif
Pfam: ANTH I_LWEQ HIP1_clath_bdg
Other DBs
NCBI-GeneID: 192154
NCBI-ProteinID: NP_001402685
RGD: 620305
Ensembl: ENSRNOG00000001448
Position
12:26769868..26904367
AA seq 1038 aa
MDRMASSMKQVPNPLPKVLSRRGVGAGMEAAERESFERTQTVSVNKAINTQEVAVKEKHA
RTCILGTHHEKGAQTFWSVVNRLPLSSNAMLCWKFCHVFHKLLRDGHPNVLKDSLRYKNE
LSDMSRMWGHLSEGYGQLCSIYLKLLRTRMEYHTKNPRFPGNLQMSDRQLDEAGESDVNN
FFQLTVEMFDYLECELNLFQTVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYTV
KLLFKLHSCLPADTLQGHRDRFMEQFTKLKDLFQRSSNLQYFKRLIQIPQLPENPPNFLR
ASALSEHISPVVVIPAEVSSPDSEPVLEKDDLMDMDASQQSLFDNKFDDIFGSSLSSDPF
NFNNQNGVNKDEKDHLIERLYREISGLTGQLDNVKIESQRAMLQLKGRVSELEAELAEQQ
HLGRQATDDCEFLRTELDELKRQREDTEKAQRSLTEIEKKAQANEQRYSKLKEKYSELVQ
NHADLLRKNAEVTKQVSVARQAQVDLEREKKELADSFARVSEQTQRKTQEQQDVLETLKH
ELATSRQELQVLHGNLETSAQSEAKWLTQIAELEKEQGSLATAAAQREEEFSALRDQLES
TQLKLAGAQDSMCQQIKDQRRILLAGARKAAELEIQEALGQLEEPALLISCAGATDHLLS
KVNSVSSCLEQLEKSRSQYLACPEEISELLHSITLLGHLTSDTIIQGTATSLRAPPESAD
SLTEACRQYGRETLAYLSSLEEEGAMEKADTTAIANCLGKIKTIGEELLPRGLDIKQEEL
GDLVDKEMAATSAAIEAATTRIEEILSKSRAGDTGVKLEVNERILGSCTSLMQAIKVLVV
ASKDLQKEIVESGRGTASPKEFYAKNSRWTEGLISASKAVGWGATIMVDAADLVVQGKGK
FEELMVCSHEIAASTAQLVAASKVKANKGSLNLTQLQQASRGVNQATAAVVASTISGKSQ
IEETDSMDFSSMTLTQIKRQEMDSQVRVLELENDLQKERQKLGELRKKHYELAGVAEGWE
EGTEASPSAVQEAVPDKE
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggaccggatggccagctccatgaagcaggtacccaacccgctgcccaaagtgttgagc
cggcgcggggttggtgctgggatggaggctgcggagcgcgagagcttcgagcggactcag
acggtcagcgtcaataaggccattaatacgcaggaagtggccgtgaaggaaaaacatgcc
aggacgtgtattctgggcacccaccatgagaaaggggcgcagaccttctggtctgtggtc
aaccgactgcctctctccagcaacgccatgctgtgctggaagttctgccacgtgttccac
aaactccttcgagacggacatccgaacgtgctgaaagactctctcagatacaaaaatgag
ttaagcgacatgagcaggatgtggggccacctgagtgaggggtatggacagctctgcagc
atctacctcaaactgctgagaacaaggatggagtaccacaccaaaaatcccaggttccca
ggtaacctccagatgagcgaccggcagctggatgaagctggggaaagtgatgttaacaac
tttttccagctcacagtggagatgtttgattacctggagtgcgaactgaacctctttcaa
actgtgttcaactccttggacatgtcccgctcagtgtccgtgaccacagctggccagtgc
cgcctcgccccgctcatccaggtcatcctggactgcagtcacctctatgactacactgtc
aagctgctcttcaagctccactcctgtcttccagctgacaccctgcagggccaccgagac
cgcttcatggagcagttcacaaagttgaaagatctgtttcagcgctccagcaaccttcag
tacttcaagcggctcattcagatcccccagttgcctgagaatccacccaacttcctacga
gcctcggccctgtccgagcacatcagtcctgtggtggtgatcccggctgaggtgtcgtct
ccagacagtgagcccgtcctggagaaggatgacctcatggacatggatgcctcccagcag
agtttgtttgacaacaagtttgatgacatcttcggcagctcgttgagcagtgaccccttc
aatttcaacaatcaaaatggcgtgaacaaggatgagaaggaccacttgattgaacgcctc
tacagagagatcagtggactgacaggacagctggacaacgtgaagattgagagccagcgg
gccatgctgcagctgaagggtcgcgtgagtgagctggaagcagagctggccgagcagcag
cacctgggacggcaggctacggatgactgcgagttcctgcgcacggagctggatgaactg
aagaggcagcgagaggacactgagaaggcgcagcgcagcctgactgagatagaaaaaaag
gcccaggccaatgaacagcggtatagcaagttaaaagagaagtacagtgaactggtgcag
aaccatgctgatctgctgcggaagaatgcagaggtgaccaagcaggtgtctgtggcccgg
caagcccaggtggatttggaaagagagaaaaaagaactagcggattcctttgcacgtgta
agcgagcagacccagcggaagactcaagagcaacaggatgttctagagaccctgaagcac
gaactggccaccagcaggcaagagctgcaggtcctccatggcaacctggaaacctctgcc
cagtctgaggcgaaatggctaacgcagatcgcggagctggagaaggaacaaggcagtttg
gcgacagccgccgctcaaagagaggaagagttctcagccctccgagaccaactggaaagc
acccagctcaaactggctggtgcccaggattccatgtgtcagcagataaaggaccagagg
agaatcctcttggcaggggccaggaaggctgcggagctcgagatacaggaggccctgggc
cagcttgaagagcctgccctcctcatcagctgtgcaggagccacagatcatcttctctcc
aaagtcaactccgtttccagctgcctcgagcaactggaaaagagccgcagccagtatctg
gcctgcccagaagagatcagtgagcttctgcactcaataaccctgcttggccacttgacc
agtgacaccatcattcaggggactgccaccagcctccgggccccaccagagtcagccgac
tctctgacggaggcctgtaggcagtatggcagagaaactctggcctatctgtcctcccta
gaggaagagggggccatggaaaaagctgacaccacagccatagcgaactgcctcggcaag
atcaagaccattggcgaggaactgctgcccaggggcttggacatcaagcaggaagagctg
ggtgacctggtggacaaggagatggcagccacttcagctgccattgaagctgccaccacc
cggatagaggaaattctcagtaagtcccgagcaggagacacgggagtcaagttggaggtg
aacgagaggatccttggctcctgtaccagcctgatgcaagctatcaaggtgctcgttgtg
gcctccaaggacctccagaaggagatagtggaaagcggcaggggtaccgcatcccctaaa
gaattttacgccaagaactctcggtggacagaagggctcatatctgcctccaaagctgtt
ggttggggagctaccatcatggtggatgctgctgaccttgtggtccaaggcaaagggaag
ttcgaggagctgatggtgtgctcgcatgagattgccgctagcacagcccagcttgtggct
gcatccaaggtgaaagcgaacaagggcagcctcaatctgacccagctgcagcaggcctct
cggggagtgaaccaggccacggccgctgtggtggcctcaaccatttccggcaaatctcaa
attgaggaaacagacagtatggacttctcaagcatgacactgacccagatcaagcgccag
gaaatggattcccaggttagggtgctggagctagaaaacgacctgcagaaggagcgccag
aaactaggagagcttcggaaaaaacactacgagctggctggtgttgctgagggctgggaa
gaagggacagaagcatcaccttctgctgttcaagaagcggtgccggacaaagagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (16)   
   RefSeq(nuc) (12)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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