KEGG   Rattus norvegicus (rat): 24230
Entry
24230             CDS       T01003                                 
Symbol
Tspo
Name
(RefSeq) translocator protein
  KO
K05770  translocator protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
rno04979  Cholesterol metabolism
rno05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    24230 (Tspo)
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    24230 (Tspo)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    24230 (Tspo)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    24230 (Tspo)
Transporters [BR:rno02000]
 Other transporters
  Others
   24230 (Tspo)
SSDB
Motif
Pfam: TspO_MBR
Other DBs
NCBI-GeneID: 24230
NCBI-ProteinID: NP_036647
RGD: 2228
Ensembl: ENSRNOG00000010549
UniProt: P16257 A6HTA0
Position
7:116600214..116610461
AA seq 169 aa
MSQSWVPAVGLTLVPSLGGFMGAYFVRGEGLRWYASLQKPSWHPPRWTLAPIWGTLYSAM
GYGSYIIWKELGGFTEEAMVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLMLVSGVAT
ATTLAWHRVSPPAARLLYPYLAWLAFATMLNYYVWRDNSGRRGGSRLTE
NT seq 510 nt   +upstreamnt  +downstreamnt
atgtctcaatcctgggtacccgccgtgggcctcactctggtgcccagcctggggggcttc
atgggagcctactttgtgcgtggtgagggcctccgctggtatgctagcttgcagaaaccc
tcctggcatccgcctcgctggacactcgctcccatctggggcacactgtattcggccatg
gggtatggctcctacataatctggaaagagctgggaggtttcacagaggaggctatggtt
cccttgggtctctacactggtcagctggctctgaactgggcatggccccccatcttcttt
ggtgcccggcagatgggctgggctttggtggacctcatgcttgtcagtggggtggcaacc
gccactaccctggcttggcaccgagtgagcccaccggctgcccgcttgctgtatccttac
ctggcctggctggcctttgccaccatgctcaactactatgtatggcgtgataactctggt
cggcgagggggctcccggctcacagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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