KEGG   Rattus norvegicus (rat): 24387
Entry
24387             CDS       T01003                                 
Symbol
Gfap
Name
(RefSeq) glial fibrillary acidic protein
  KO
K05640  glial fibrillary acidic protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04630  JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    24387 (Gfap)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    24387 (Gfap)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    24387 (Gfap)
Membrane trafficking [BR:rno04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    24387 (Gfap)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     24387 (Gfap)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 GAS
Other DBs
NCBI-GeneID: 24387
NCBI-ProteinID: NP_058705
RGD: 2679
Ensembl: ENSRNOG00000002919
UniProt: P47819 A6HJN5
Position
10:complement(88352987..88361661)
AA seq 430 aa
MERRRITSARRSYASSETMVRGHGPTRHLGTIPRLSLSRMTPPLPARVDFSLAGALNAGF
KETRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRE
LRLRLDQLTTNSARLEVERDNLTQDLGTLRQKLQDETNLRLEAENNLAVYRQEADEATLA
RVDLERKVESLEEEIQFLRKIHEEEVRELQEQLAQQQVHVEMDVAKPDLTAALREIRTQY
EAVATSNMQETEEWYRSKFADLTDVASRNAELLRQAKHEANDYRRQLQALTCDLESLRGT
NESLERQMREQEERHARESASYQEALARLEEEGQSLKEEMARHLQEYQDLLNVKLALDIE
IATYRKLLEGEENRITIPVQTFSNLQIRETSLDTKSVSEGHLKRNIVVKTVEMRDGEVIK
ESKQEHKDVM
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggagcggagacgtatcacctctgcacgccgctcctatgcctcctccgagacgatggtc
aggggccatggtcctaccagacacctgggtaccattccgcgcctctccctgtctcgaatg
acgcctccactccctgccagggtagacttctccctggccggggcgctcaatgccggcttc
aaagagactcgggccagcgagcgtgcggagatgatggagctcaatgaccgctttgctagc
tacatcgagaaggtccgcttcctggaacagcaaaacaaggcgctggcagctgagctgaac
cagcttcgagccaaggagcccaccaaactggctgacgtttaccaggcagaacttcgggag
ctgcggctgcgtctggaccagcttactaccaacagtgcccggctggaggtggagagggac
aatctcacacaggacctcggcaccctgaggcagaagctccaagatgaaaccaacctgagg
ctggaggcggagaacaacctggctgtgtacagacaggaggcggatgaagccaccttggct
cgtgtggatctggagaggaaggttgagtcgctggaggaggagatccagttcttgaggaag
atccatgaggaggaagttcgagaactccaggagcagctggcccagcagcaggtccacgtg
gagatggatgtggccaagccagacctcacagcggctctgagagagattcgcactcagtac
gaggcagtggccaccagtaacatgcaagaaacagaagagtggtatcggtccaagtttgca
gacctcacagacgttgcttcccgcaacgcagagctgctccgccaggccaagcacgaggct
aatgactatcgccgccaactgcaggccttgacctgcgaccttgagtccttgcgcggcacg
aacgagtccttggagaggcaaatgcgcgaacaggaggagcgccacgcgcgggagtcggcg
agttaccaggaggcactcgctcggctggaggaggagggccaaagcctcaaggaggagatg
gcccgccacctgcaggagtaccaggatctactcaacgttaagctagccctggacatcgag
atcgccacctacaggaaattgctggagggcgaagaaaaccgcatcaccattcctgtacag
actttctccaacctccagatccgagaaaccagcctggacaccaaatctgtgtcagaaggc
cacctcaagaggaacatcgtggtaaagacggtggagatgcgggatggcgaggtcattaag
gagtcgaagcaggagcacaaggatgtgatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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