KEGG   Rattus norvegicus (rat): 24407
Entry
24407             CDS       T01003                                 
Symbol
Grik5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5 precursor
  KO
K05205  glutamate receptor, ionotropic kainate 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
rno04724  Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    24407 (Grik5)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    24407 (Grik5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    24407 (Grik5)
Ion channels [BR:rno04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   24407 (Grik5)
SSDB
Motif
Pfam: ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3 Peripla_BP_6
Other DBs
NCBI-GeneID: 24407
NCBI-ProteinID: NP_113696
RGD: 2735
Ensembl: ENSRNOG00000020310
UniProt: Q63273 A6J936
Structure
Position
1:complement(89733736..89795769)
AA seq 979 aa
MPAELLLLLIVAFANPSCQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAK
ARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKV
GPEETPRLQYLRFASVSLYPSNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRG
FLISKETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDANASISHLVLRKASELGMTSAFY
KYILTTMDFPILHLDGIVEDSSNILGFSMFNTSHPFYPEFVRSLNMSWRENCEASTYPGP
ALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTG
RVEFNSKGQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVT
TILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGS
WTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLD
PFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPV
GGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLAD
QTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFL
LESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKR
KWWEGGRCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVS
VCQEMLQELRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKLYSAGAGGDAG
AHGGPQRLLDDPGPPGGPRPQAPTPCTHVRVCQECRRIQALRASGAGAPPRGLGTPAEAT
SPPRPRPGPTGPRELTEHE
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgccggctgagctgctgctgctgctgatagtcgccttcgccaaccccagctgccaggtg
ctgtcatcactgcgcatggctgcaatcctggacgaccagaccgtgtgtggccgtggtgag
cgtctggccctggccctggcccgagagcagatcaatgggatcatcgaggtcccagccaag
gcccgagtggaagtagacatctttgagctgcaacgggacagccagtacgagactacggac
accatgtgtcagatcctgcccaagggggttgtgtctgtcttgggaccctcctccagccca
gcttctgcctccaccgtgagccatatctgtggggagaaggagattccccacatcaaggta
ggccctgaggagacaccccgccttcagtacctccgctttgcatctgtcagcctgtatccc
agtaatgaagatgtcagcctggcagtctcccggatcctcaagtcctttaactacccctcc
gctagcctcatctgcgccaaagctgagtgcctgctgcggttagaagaactggtgcgaggc
ttcctcatctccaaggagacactgtccgtgaggatgcttgatgacagccgggaccccacg
ccgctactcaaggagatccgagatgacaaagtgtccaccatcatcatcgatgccaacgcg
tccatctcccaccttgtcctccgtaaggcttcggagctgggaatgacctcagcgttttac
aagtacatcctcaccaccatggacttccccatcctgcatctggacggtatcgtagaggac
tcctccaacatcttgggcttttccatgttcaacacctcccatcccttctacccggagttt
gtgcgcagcctcaacatgtcctggagggagaactgcgaagccagcacctaccctggccct
gcgctgtcggcagccctgatgtttgatgccgtgcatgtggtggtaagcgctgtccgagag
ctgaaccggagccaggagattggtgtcaagccactggcttgcacttcggccaacatctgg
ccccatgggaccagcctcatgaactacctgcgcatggtagagtatgacgggctgactggg
cgggttgagttcaacagcaaagggcagaggaccaactacacactgcgcatcctggagaag
tcccgccagggccaccgtgagataggggtgtggtactctaaccggaccctggccatgaat
gctaccaccctggacatcaacctgtcacagactctagccaacaagactctggtggtcaca
acaatcctggagaacccgtatgtcatgcgccggcccaacttccaggccctgtcagggaac
gagcgctttgagggcttctgcgtggacatgcttcgggagctggccgagctgctgcgcttc
cggtatcgcctgcggttggtggaggacggactgtacggggcacctgagcccaatggttcc
tggacaggaatggttggcgagctcatcaaccggaaggcagacctggctgtggcagccttc
accatcaccgcggagagagagaaggtcatcgacttctccaagccattcatgaccctgggg
atcagcatcctctacagggtgcacatgggccgcaagcctggctacttctccttcctggac
cctttctcccctgccgtgtggctcttcatgcttcttgcctacctggctgtcagctgtgtc
ttgtttctggctgccaggctgagcccttatgagtggtataaccctcacccgtgtcttcgg
gcgcgtccccatatcctggagaaccagtacacgctgggtaacagcctttggttccctgtg
ggtggcttcatgcagcagggctcggagatcatgccccgggcgctgtccacacgctgtgtc
agcggagtctggtgggccttcaccttgatcatcatctcctcctacacggccaacctggct
gccttcctcacggtgcagcgcatggaggtgccggtggagtctgcagacgacttggcggat
cagaccaacattgagtacggcactatccacgctggctccaccatgaccttctttcagaac
tcacggtaccagacgtaccagcggatgtggaattacatgcagtcgaagcagcccagcgtg
ttcgtcaagagcacagaggaggggatcgcccgtgtcctcaactcacgttacgccttcctg
ctggagtccaccatgaacgagtaccacaggcgcctcaattgcaacctcacccagatcggg
ggcctcctcgacaccaagggctacggcatcggcatgccgctgggctccccattccgggat
gagatcacgctggccatcctgcagctccaggagaacaacaggctggagatcctgaagcgc
aagtggtgggagggcggccggtgccccaaggaggaggaccacagggccaaaggtttgggc
atggagaacattggcggtatttttgtcgtgctgatctgtggcctcatcattgctgtcttc
gtggcggtcatggaattcatctggtccacgcggaggtcagcggagtctgaggaggtgtcg
gtgtgccaggagatgctgcaggagctgcgccacgccgtgtcttgccgcaagacctcgcgt
tcccgccggcgccggcgccctggcggcccgagccgggccctgctgtcgctgcgcgcggtc
cgcgagatgcgactcagcaacggcaagctctactcggccggcgcgggcggggacgcgggc
gcgcacgggggtccgcagcgcctcctggacgaccccgggcctcctgggggaccccggccc
caggctcccacgccctgcacgcacgtgcgcgtctgccaggagtgcaggcgcatccaggcg
ctgcgagcttcaggggccggggcgcccccgcgtggcctgggcactccggccgaagccacc
agcccgcctcggccgcggcctggacccactggaccccgcgagctgactgagcatgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
3D Structure (6)   
   PDB (6)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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