KEGG   Rattus norvegicus (rat): 24481
Entry
24481             CDS       T01003                                 
Symbol
Ifnb1
Name
(RefSeq) interferon beta precursor
  KO
K05415  interferon beta
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04060  Cytokine-cytokine receptor interaction
rno04151  PI3K-Akt signaling pathway
rno04217  Necroptosis
rno04380  Osteoclast differentiation
rno04620  Toll-like receptor signaling pathway
rno04621  NOD-like receptor signaling pathway
rno04622  RIG-I-like receptor signaling pathway
rno04623  Cytosolic DNA-sensing pathway
rno04630  JAK-STAT signaling pathway
rno04650  Natural killer cell mediated cytotoxicity
rno04668  TNF signaling pathway
rno04936  Alcoholic liver disease
rno05135  Yersinia infection
rno05142  Chagas disease
rno05152  Tuberculosis
rno05160  Hepatitis C
rno05161  Hepatitis B
rno05162  Measles
rno05163  Human cytomegalovirus infection
rno05164  Influenza A
rno05165  Human papillomavirus infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05168  Herpes simplex virus 1 infection
rno05169  Epstein-Barr virus infection
rno05170  Human immunodeficiency virus 1 infection
rno05171  Coronavirus disease - COVID-19
rno05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    24481 (Ifnb1)
   04668 TNF signaling pathway
    24481 (Ifnb1)
   04151 PI3K-Akt signaling pathway
    24481 (Ifnb1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    24481 (Ifnb1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    24481 (Ifnb1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    24481 (Ifnb1)
   04621 NOD-like receptor signaling pathway
    24481 (Ifnb1)
   04622 RIG-I-like receptor signaling pathway
    24481 (Ifnb1)
   04623 Cytosolic DNA-sensing pathway
    24481 (Ifnb1)
   04650 Natural killer cell mediated cytotoxicity
    24481 (Ifnb1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    24481 (Ifnb1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    24481 (Ifnb1)
   05161 Hepatitis B
    24481 (Ifnb1)
   05160 Hepatitis C
    24481 (Ifnb1)
   05171 Coronavirus disease - COVID-19
    24481 (Ifnb1)
   05164 Influenza A
    24481 (Ifnb1)
   05162 Measles
    24481 (Ifnb1)
   05168 Herpes simplex virus 1 infection
    24481 (Ifnb1)
   05163 Human cytomegalovirus infection
    24481 (Ifnb1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    24481 (Ifnb1)
   05169 Epstein-Barr virus infection
    24481 (Ifnb1)
   05165 Human papillomavirus infection
    24481 (Ifnb1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    24481 (Ifnb1)
   05152 Tuberculosis
    24481 (Ifnb1)
  09174 Infectious disease: parasitic
   05142 Chagas disease
    24481 (Ifnb1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    24481 (Ifnb1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    24481 (Ifnb1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:rno04052]
    24481 (Ifnb1)
Cytokines and neuropeptides [BR:rno04052]
 Cytokines
  Interferons
   24481 (Ifnb1)
SSDB
Motif
Pfam: Interferon YWFCY
Other DBs
NCBI-GeneID: 24481
NCBI-ProteinID: NP_062000
RGD: 2865
Ensembl: ENSRNOG00000006268
UniProt: P70499 A0A7R8GV74
Position
5:complement(108066650..108067487)
AA seq 184 aa
MANRWTLHIAFLLCFSTTALSIDYKQLQFRQSTSIRTCQKLLRQLNGRLNLSYRTDFKIP
MEVMHPSQMEKSYTAFAIQVMLQNVFLVFRSNFSSTGWNETIVESLLDELHQQTELLEII
LKEKQEERLTWVTSTTTLGLKSYYWRVQRYLKDKKYNSYAWMVVRAEVFRNFSIILRLNR
NFQN
NT seq 555 nt   +upstreamnt  +downstreamnt
atggccaacaggtggaccctccacattgcgttcctgctgtgcttctccaccactgccctc
tccatcgactacaagcagctccagttccgacaaagcactagcattcggacatgtcagaag
ctcctgaggcagctgaatggaaggctcaacctcagctacaggacggacttcaagatccct
atggaggtgatgcacccgtcacagatggagaagagttacactgcctttgccattcaagtg
atgctccagaatgtctttcttgtcttcagaagcaatttctccagcactgggtggaatgag
actattgttgaaagtctcttggatgaactacatcagcagacagagcttctggagataata
ctaaaggaaaagcaagaggaaagattgacttgggtgacatccacgactactttaggcttg
aagagctattactggagggtacaaaggtaccttaaagacaagaagtacaacagctatgcc
tggatggtggtccgagcagaagtcttcaggaacttttccattattctaagacttaataga
aacttccagaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (27)   
   KEGG PATHWAY (27)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (43)   

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