KEGG   Rattus norvegicus (rat): 246047
Entry
246047            CDS       T01003                                 
Symbol
Calcoco1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
  KO
K25828  calcium-binding and coiled-coil domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    246047 (Calcoco1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    Others
     246047 (Calcoco1)
SSDB
Motif
Pfam: CALCOCO1 SKICH Zn-C2H2_12 Crescentin DUF724 CENP-F_leu_zip Vps23_core
Other DBs
NCBI-GeneID: 246047
NCBI-ProteinID: NP_631929
RGD: 619812
Ensembl: ENSRNOG00000015447
UniProt: Q66HR5
Position
7:complement(135713208..135728044)
AA seq 691 aa
MEESSLSRAPSRGGVSFLNVARTYVPNTKVECHYTLPPGTTPSASDWIGIFKVEAACVRD
YHTFVWSSVPETTTDGSPTHASVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFRE
PRPMDELVTLEEADGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEDQVTELRSR
VQELEAALATARQEHSELTEQYKGLSRSHGELSEERDILSQQQGEHVARILELEDDIQTM
SDKVLMKEVELDRVRDMVKALTREQEKLLGQLKEFQADKEQSEAELQTVREENCHLNTEL
QEAKGRQEEQGAQVQRLKDKVAHMKDTLGQTQQKVAELEPLKEQLRGVQELAASSQQKAA
LLGEELASAAGARDRTIAELHRSRLEVAEVNGRLAELSLHMKEEKCQWSKERTGLLQSME
AEKDKILKLSAEILRLEKTVQEERSQSHMFKTELAREKDSSLVQLSESKRELTELRSALR
VLQKEKEQLQTEKQELLEYMRKLEARLEKVADEKWNEDAATEDEEATAGLSCPAALTDSE
DESPEDMRLPSYGLCERGNTSSSPPGPRESSSLVVINQPAPIAPQLSGPGEASSSDSEAE
DEKSVLMAAVQSGGEEANLLLPELGSTFYDVASGFAVSSLSEASTGVPAIPAWKECPICK
ERFPAESDKDALEDHMDGHFFFSTQDPFTFE
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggaagaatcatcactaagccgggcaccatcccggggtggagtcagcttcctgaacgtg
gcccggacctacgtccccaacaccaaggtggaatgtcactacactctgcctccgggcacc
acgcccagcgccagcgactggattggcatttttaaggtggaagctgcctgtgttcgggat
tatcacacatttgtgtggtcttcagtgccagaaactacaacggatggctcccccacccac
gccagtgtccaattccaagccagctacctgcccaaaccaggagcccaactctaccagttc
cggtatgtgaaccgccagggccgggtgtgtgggcagagccccccattccagttccgagag
ccaaggcccatggatgagctggtgaccctggaggaggctgatggaggctctgacatcctg
ttggttgtccctaaggccaccgtgcttcagaaccagctggatgagagccagcaggagcgg
aatgacctgatgcagctgaagctgcagttggaggatcaggtgacagagctgaggagccga
gtgcaggagctggaagcagctctggccacggccagacaggagcattcagagctcaccgag
caatacaagggtctctcccggtcccatggggagctctcagaagaaagggacatcctgagc
cagcaacagggagagcatgtggcccgtatcctggagttagaggatgacatccagaccatg
agtgacaaagtgctgatgaaggaggtggagctggacagggttagagacatggtgaaggcc
ctgacacgggaacaagagaaactcctggggcagctgaaggaattccaggcagacaaggag
cagagtgaggctgagttacaaacggtgcgagaggagaactgccacttaaatacagagctg
caggaggccaagggccggcaagaagagcaaggtgctcaggtccagcgactgaaggacaag
gtggcccacatgaaggacaccctgggccaaacccagcagaaagtggccgagctggagcct
ctgaaagagcagctccgaggggtccaggaacttgcagcctcaagccaacagaaagcggcc
cttcttggggaggagttggccagtgcagcaggagctagagaccgaaccatagctgagcta
caccgcagccgactggaggtggctgaagtcaatggccgactggctgagctcagcctgcac
atgaaggaggaaaaatgccaatggagcaaggagcggacagggctgctgcagagcatggag
gctgagaaggataagatcctgaagctaagtgcagagatcctccgactggagaagacagtg
caggaggagaggagccagagccacatgttcaagaccgagctggcccgagaaaaggattct
agcctggtgcagttatcagagagtaagcgggagctcacagagctgcggtcagccctccga
gtacttcagaaggagaaggagcagttgcagacagagaaacaggagctgctggagtacatg
aggaaactggaggcccgcctggaaaaggtggcagatgagaagtggaacgaagacgctgcc
acagaggatgaggaagccactgctgggctgagctgccctgcagctctgacagactcggag
gatgagtccccagaagacatgaggctcccctcctacggcttgtgtgagcgtggaaacaca
agctcctctcctcctggacctcgggagtcttcttctcttgttgttatcaaccagccagca
cccattgctccccagctctcagggccaggggaggccagcagctcagactcagaggctgaa
gatgagaagtcagtcttgatggcagctgtgcagagtggtggtgaggaagccaaccttctg
cttcctgagctcggcagtaccttctatgatgtggccagtggctttgcagtgagttctctg
tcagaggccagcactggggtcccagccatccctgcctggaaggagtgtcctatctgtaag
gagcgcttccctgctgagagtgacaaggatgccctggaggaccacatggatggacatttc
tttttcagcacccaggaccctttcacctttgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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