KEGG   Rattus norvegicus (rat): 24609
Entry
24609             CDS       T01003                                 
Symbol
Odc1
Name
(RefSeq) ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00330  Arginine and proline metabolism
rno00480  Glutathione metabolism
rno01100  Metabolic pathways
rno04148  Efferocytosis
Module
rno_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    24609 (Odc1)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    24609 (Odc1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    24609 (Odc1)
Enzymes [BR:rno01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     24609 (Odc1)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC
Other DBs
NCBI-GeneID: 24609
NCBI-ProteinID: NP_001289012
RGD: 3227
Ensembl: ENSRNOG00000005424
UniProt: P09057 A6HAU9
Position
6:46058439..46065148
AA seq 461 aa
MGSFTKEEFDCHILDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDVLKKHLRWLKALP
RVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLVQGLGVPPERIIYANPCKQVSQI
KYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLKTSRLL
LERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARCVFDMGTEVGFSMYLLDIGGGFPG
SEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQ
TGSDDEDESNEQTLMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPTC
DGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMSRSMWQLMKQI
QSHGFPPEVEEQDVGTLPMSCAQESGMDRHPAACASASINV
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgggcagctttactaaggaagagtttgactgccatatcctcgatgaaggtttcactgct
aaggacattctggaccaaaaaatcaatgaagtttcttcctctgatgataaggatgctttc
tatgttgcggacctcggagacgttctaaagaagcatctgaggtggctgaaagctcttccc
cgtgttactcccttctatgctgtcaagtgtaatgacagcagagccatagtgagcaccctg
gctgccattgggacaggatttgattgtgcaagcaagactgaaatacagttggtgcagggg
cttggggtgcctccagagaggattatctatgcaaatccttgtaagcaagtgtctcagatc
aagtatgctgccagtaatggagtccagatgatgacttttgacagtgaaattgagttgatg
aaagttgccagagcacatccaaaggcaaagttggttttgcggattgccactgatgattcc
aaagcagtttgtcggctcagtgttaagtttggtgccacactgaaaaccagcaggcttctc
ttggaacgggcaaaagagctaaatattgatgtcattggtgtcagcttccatgtgggcagt
gggtgtactgaccctgagaccttcgtgcaggcagtgtcagatgcccgctgtgtctttgac
atgggaacagaagttggtttcagcatgtatctgcttgacattggtggtggctttcctggg
tctgaagacacgaagcttaaatttgaggagatcaccagtgtaatcaacccagctctggac
aagtacttcccatcggactctggagtgagaatcatagctgagccaggcagatactacgtc
gcatcagctttcacacttgcagtgaatatcattgccaaaaaaaccgtgtggaaggagcag
accggctcggacgatgaagatgagtcaaacgagcaaactttgatgtattacgtgaatgat
ggagtgtatgggtcatttaactgcattctttatgaccatgcacatgtgaaggccctgctg
cagaagagacccaagccagatgagaagtattactcatccagcatctggggaccaacatgt
gatggccttgatcggatcgtcgagcgctgtagcctgcctgaaatgcatgtgggtgattgg
atgctgtttgagaacatgggtgcatacactgttgctgctgcttctactttcaatgggttc
cagaggccaaacatctactacgtaatgtcacggtcaatgtggcaactcatgaagcaaatc
cagagccatggcttcccgccagaagtggaggagcaggatgttggcactctgcccatgtct
tgtgcccaggagagcgggatggaccgtcaccctgcagcctgtgcttctgctagtatcaat
gtatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (20)   
   RefSeq(nuc) (6)   
   GenBank (7)   
   EMBL (7)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

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