KEGG   Rattus norvegicus (rat): 246136
Entry
246136            CDS       T01003                                 
Symbol
Man2c1
Name
(RefSeq) alpha-mannosidase 2C1
  KO
K01191  alpha-mannosidase [EC:3.2.1.24]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00511  Other glycan degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00511 Other glycan degradation
    246136 (Man2c1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    246136 (Man2c1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.24  alpha-mannosidase
     246136 (Man2c1)
Membrane trafficking [BR:rno04131]
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Selective cargos
    246136 (Man2c1)
SSDB
Motif
Pfam: Glyco_hydro_38N Glyco_hydro_38C Alpha-mann_mid Glyco_hydro38C2
Other DBs
NCBI-GeneID: 246136
NCBI-ProteinID: NP_640349
RGD: 628787
Ensembl: ENSRNOG00000030654
UniProt: P21139 Q5M9I2
Position
8:66434480..66445649
AA seq 1039 aa
MAAAPFLKHWRTTFERVEKFVSPIYFTDCNLRGRLFGDSCPVTLSSFLTPERLPYEKAVQ
QNFSPAQVGDSFGPTWWTCWFRVELVIPEVWVGKEVHLCWESDGESLVWRDGEPVQGLTK
EGEKTSYVLSERLHAADPRSLTLYVEVACNGLLGAGKGSMIAAPDPEKMFQLSQAKLAVF
HRDVHNLLVDLELLLGVAKGLGEDNQRSFQALYTANQMVNICDPAQPETYPAAEALASKF
FGQRGGESQHTIHATGHCHIDTAWLWPFKETVRKCARSWSTAVKLMERNTEFTFACSQAQ
QLEWVKNQYPGLYAQLQEFACRGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEF
GKMCSEFWLPDTFGYSAQLPQIMQGCGIKRFLTQKLSWNLVNSFPHHTFFWEGLDGSQVL
VHFPPGDSYGMQGSVEEVLKTVTNNRDKGRTNHSGFLFGFGDGGGGPTQTMLDRLKRLGN
TDGLPRVQLSSPGQLFTALERDSGQLCTWVGELFLELHNGTYTTHAQLKKGNRECEQILH
DVELLSSLALARSAQFLYPAVQLQRLWRLLLLNQFHDVVTGSCIQLVAEDAMNYYEDIRS
HGNTLLSAAAAALCAGEPGPKGLLIINTLPWKRTEVLALPKPCGAHSLALVTVPSIGYAP
APTPTSLQPLLPQQPVFVMQETDGSVTLDNGIIRVRLDPTGCLTSLVLVASGREAIAEGA
LGNQFVLFDDVPLYWDAWDVMDYHLETRKPVRGQAGTLAVGAEGGLRGSAWFLLQISPNS
RLSQEVVLDVGCPYVRFHTEVHWHETHKFLKVEFPARVRSPQATYEIQFGHLQRPTHNNT
SWDWARYEVWAHRWIDLSECDFGLALLNNCKYGTSVRGNVLSLSLLRAPKAPDVTADMGR
HEFTYALMPHKGSFQEAGVIQAAYNLNFPLLALPAPGPAPDTTWSAFSVSSPAVVLETIK
QAEKSHQHRTLVLRLYEAHGSHVDCWLHTSLPVQEATLCDLLEQRDPTGHLSLQDNRLKL
TFSPFQVRSLLLVLQPPAN
NT seq 3120 nt   +upstreamnt  +downstreamnt
atggcggcagcgccgttcttgaagcactggcgcaccacttttgagcgggtggagaagttc
gtgtccccgatctacttcaccgactgtaaccttcgcggcaggctcttcggggacagctgc
ccggtgacactctccagcttcctgacgccggaaaggcttccctatgagaaggcagtgcag
cagaacttcagccctgcgcaggtcggcgacagcttcggacccacatggtggacctgctgg
tttcgggtagaactggtcatccctgaagtttgggtgggcaaggaagttcatctttgctgg
gaaagtgatggagaaagccttgtctggcgtgatggggaacctgtccagggtttgaccaag
gagggtgaaaagactagttatgtcctgagtgagaggctgcacgcagcagatcctcggagc
ttgactctctatgtggaagtagcctgcaatgggcttctgggagccgggaagggaagcatg
atcgcagcccctgaccctgagaagatgttccagctgagccaggctaagctggctgtgttc
caccgggatgtccacaatctcctggtggacctggagctgttgctgggtgtggccaagggc
ctcggggaggacaaccagcgcagcttccaggccctgtacacagccaaccagatggtgaac
atatgtgaccctgcgcagcctgagacttacccagcagccgaggccctggcctccaagttc
tttggccaacgtggaggtgaaagccagcataccatccatgcaacaggacactgtcacatt
gatacagcctggctttggcccttcaaggagactgtgaggaaatgtgcccggagctggtca
acagctgtgaagctcatggagcggaacactgagttcacctttgcctgctctcaggcacaa
cagctcgagtgggtaaagaaccaataccctggtctgtatgcccagctccaggagtttgcc
tgccgaggacagtttgtgcctgtggggggcacctgggtagaaatggatgggaaccttccc
agtggagaggccatggtgaggcagttcctacagggccagaacttctttctgcaagagttt
ggaaagatgtgctctgagttctggctgccagatacatttggctactcagcacagctcccc
cagatcatgcaaggctgtggcatcaaacgcttcctgacacagaaactgagctggaacttg
gtcaactccttcccacaccataccttcttctgggaggggctggatggctcccaagtgctg
gtacacttcccccctggagactcatatggaatgcagggcagtgtggaagaggtgctgaag
actgtgaccaacaaccgggacaagggacggaccaaccacagtggcttcctctttggcttc
ggggatgggggtggtggccccacacagaccatgttggaccgattgaagcggctgggcaac
actgatgggctgcccagggtgcagctgtcttctcctggacagctcttcacagcactggag
agagactcagggcagctgtgcacatgggttggggaactcttcttggagctgcacaatggc
acctatactacccatgcccagctcaagaaggggaaccgagaatgtgagcagattcttcat
gacgtggagctgctcagcagccttgccctagcccgaagtgcccagttcctgtacccggca
gtccagctgcagcgcctctggaggctcctactcctcaaccagttccatgatgtggtgact
ggaagctgcattcagctggtggcagaagatgccatgaactactatgaagacatccgttct
catggcaatacgctgctcagtgctgcagccgcagccttgtgtgctggggagccaggtccc
aagggcctcctcattatcaacacactgccctggaagcgcacagaagtgttggcactaccc
aagccttgtggggctcacagcctagccctggtgacagtgcccagtattggctatgctcct
gctcccacccctacttcactgcagcccctcctaccccagcagcccgtgtttgtgatgcag
gagactgacggttccgtgacgctggacaatggcatcatccgggtgagactggatccaact
ggctgtcttacttccctggtcctggtggcttctggcagggaagccattgctgagggtgcc
ctggggaaccagtttgtgctgtttgatgatgtgccactgtactgggatgcatgggacgtc
atggactaccatctagagacacggaagcctgtgcggggccaggcaggtaccctggcagta
ggcgctgaaggtggccttcggggtagtgcctggttcctgctacagatcagccccaacagt
cggctcagccaggaagtcgtgctggatgttggttgcccctatgtccgcttccacacggag
gtgcactggcacgagacccacaagttcctgaaggtggagttccccgctcgagtacggagc
ccccaggctacctatgagatccagtttgggcaccttcagaggccgacccacaacaacacc
tcctgggactgggctcgctatgaggtgtgggctcatcgctggatagatctgtccgagtgt
gactttgggctggccctgctcaacaactgcaagtatggaacgtcagtacgaggcaacgtc
ctcagcctctcactgctgcgtgcacccaaggctccagatgttactgctgacatggggcgc
catgaattcacttatgccttgatgccacacaagggttctttccaagaagctggtgttatc
caggctgcctacaacctcaactttcccctcttggcactgccagctccaggcccagcccct
gataccacctggagcgccttttccgtgtcttcaccagcagtcgtgttggagaccatcaag
caggccgagaagagccatcagcaccgcacactggttctaaggctgtatgaggctcatggc
agccatgtggactgctggctacacacatcattgcctgttcaggaggccaccctttgtgac
ctcctggagcagcgagaccctaccggtcacctgtcccttcaggacaaccgcctgaagctc
accttttctccctttcaagtgaggtccttattgctcgtgcttcagcctccagcaaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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