KEGG   Rattus norvegicus (rat): 246214
Entry
246214            CDS       T01003                                 
Symbol
Lrit1
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1 precursor
  KO
K24491  leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    246214 (Lrit1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   246214 (Lrit1)
SSDB
Motif
Pfam: LRR_8 I-set Ig_3 LRR_4 ig fn3 LRR_1 Ig_2 LRRNT IlvGEDA_leader
Other DBs
NCBI-GeneID: 246214
NCBI-ProteinID: NP_647547
RGD: 628607
Ensembl: ENSRNOG00000012790
UniProt: Q9JMH2 A6K9I9
Position
16:12842339..12850266
AA seq 623 aa
MWVALGMLWLLALGGPHQAWSFCPSQCSCSLHILSDGSKARTVVCSDPDLTLPPASIPPD
TCKLRLERTAIRRVPGETFRPLSRLEQLWLPYNALSELSTLMLRGLRRLRELRLPGNHLV
TFPWAALKDTPQLQLLDLQANRLSTLPPEAVHFLENLTFLDLSNNQLMRLPEELLDTWAH
LKTGPYLSSRRTRLVLGLQDNPWVCDCRLYDLVHLLDGWASNLIFIEARLRCGSPRSLAG
VAFSQLELRKCQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWRRANGRPLNGTVH
QEVSSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGASETLISLIVTEPQTSTEYTGIPGA
LWARTGEGAEAAAYNNKLVARHVPHVPEPVALATKPSVPSIKEELPLQNFQMDVPGEFSR
EPSEHQETQMVRSLKVVGDTYHSVSLVWKAPQAGNTTAFSVLYAVFGQRDMRRMTVEAGK
TSVTIEGLAPKTKYVACVCVRGLVPTKEQCVIFSTDEVVDAEGTQRLINMVVISVAAIIA
LPPTLLVCCGALRRRCHKCRAGGSAEASGAYVNLERLGHSEDGSEELSRSSLSEADRLLS
ARSSLDSQVLGVRGGRRINEYFC
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgtgggtggccctgggcatgctctggctccttgcacttgggggacctcaccaggcctgg
agcttctgtccttctcaatgcagctgcagcctgcacatcctgagtgacggcagcaaggcc
aggacagtggtgtgcagcgaccctgacttgactctgcccccagcttcgattcctccggac
acctgcaagctgcgcctagagcgaaccgccattcgcagggtgcccggagagaccttcagg
cctctcagccgcctggagcagctgtggctaccctacaatgctctcagtgagcttagtacc
ctcatgctcaggggtctgcgacgtctacgagagctgcggctgcctgggaaccacctggtc
actttcccctgggctgcactcaaggacactccacagctgcaactactggacctgcaggcc
aatcgcctctcgaccttgccacccgaggctgtacacttcctggaaaaccttactttcctg
gacctctccaataaccagctgatgaggcttcctgaggagctactggatacgtgggctcac
ctgaagaccggaccctatctttccagccgtcgtaccaggctagtcttagggcttcaggac
aacccctgggtgtgtgactgtcggctctatgacttagttcatctcctagatggctgggct
tccaacttgatcttcatcgaggctagactgaggtgtggcagcccacgcagcctggctgga
gtggccttcagccagctggagctaagaaagtgtcagagcccagagctccgtccaggggtg
accagcatcatatctcctttgggtagcacagtgttgctacgttgtggagcaactgggatc
ccaggacctgagatgagctggaggagagccaatggacgaccactcaatggcacagttcac
caggaagtctccagtgatggctcaagttggactttgctggatctgcctgttgtgtctctc
tttgactctggggactacatctgccaagccaagaactttctgggagcttctgaaactctt
atctccttgattgtcactgagccacagacttctacagaatatactgggattccaggggcc
ctatgggcaaggacaggggaaggggcagaagctgctgcttacaacaacaagctagtggcc
aggcatgttcctcatgttcctgagcctgtagccctggctaccaagccctcagtgcccagc
ataaaggaggagctgcctctccagaactttcagatggatgtcccaggggagttctccaga
gagccatcagaacaccaggagacacagatggtcaggtctctcaaggtggtaggagatact
taccacagtgtgtctttggtgtggaaggcccctcaagctgggaacacaactgcctttagt
gtcctttatgcagtctttgggcagcgagacatgcgaaggatgactgtggaggccgggaag
acgagtgttactattgaggggcttgccccaaagaccaagtacgtggcatgtgtctgtgtg
cggggcctggtgcctacgaaggaacagtgtgtcatcttctctactgatgaggtggtagat
gcagagggcacccagcgactcatcaacatggtggtcatcagtgtggcggccatcatcgcg
ctgcctcccactctgctggtttgctgcggggctctccgaagacgctgccacaagtgccgc
gctgggggctctgcagaggcatccggggcctatgttaatttggaaagactaggccacagt
gaagatggctcagaggagctgtccaggagcagcctcagtgaagcagataggcttctctca
gcacgttccagcctggactcccaggtcttgggtgtcaggggcggcagacgcatcaatgag
tacttctgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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