KEGG   Rattus norvegicus (rat): 246217
Entry
246217            CDS       T01003                                 
Symbol
Ngef
Name
(RefSeq) ephexin-1
  KO
K07525  neuronal guanine nucleotide exchange factor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    246217 (Ngef)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    246217 (Ngef)
Membrane trafficking [BR:rno04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    246217 (Ngef)
SSDB
Motif
Pfam: RhoGEF SH3_1 SH3_9 PH SH3_2 SH3_16
Other DBs
NCBI-GeneID: 246217
NCBI-ProteinID: NP_001129713
RGD: 1309055
Ensembl: ENSRNOG00000016653
UniProt: G3V856 A6JWN4
Position
9:complement(95594823..95692381)
AA seq 616 aa
MELLAAAFSAACAVDHDSSTSESDTRDSAAGHLPGSESSSTPGNGTTPEECPALTDSPTT
LTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGNSDGSQAGE
DNAEEEEEEEEEPASPPERRALPQICLLSNPHSRFNLWQDLPEIQSSGVLDILQPEETKL
QEAMFELVTSEASYYKSLNLLVSHFMENERLKKILHPSEAHILFSNVLDVMAVSERFLLE
LEHRMEENIVISDVCDIVYRYAADHFSVYITYVSNQTYQERTYKQLLQEKTAFRELIAQL
ELDPKCKGLPLSSFLILPFQRITRLKLLVQNILKRVEEGSEREGTALDAHKELEMVVKAC
NEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLF
REIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENADD
REATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLE
LADILNILEKTEDGWIFGERLHDQERGWFPSSMTEEILNPKIRSQNLKECFRVHKMEDPQ
RSQNKDRRKLGSRNRQ
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggagctgctggctgccgctttcagcgctgcctgcgccgtggaccacgacagctccacc
tcggagagcgacacgcgcgactcggcggcgggacacctgcccggcagcgagtcatcctcc
acccctggaaatggaaccacacccgaggagtgcccggccctcaccgacagccccaccacg
ctcaccgaggccctgcagatgatccatcccattcccgccgactcctggagaaacctcatt
gaacaaatagggctcctgtaccaagagtatagagacaaatcgactctccaagagatcgaa
acccggaggcaacaggatgcagaaatacaaggcaactcggatgggtcccaggctggggaa
gacaatgcagaggaggaggaagaggaggaggaggagccggccagcccccctgagaggaga
gctctgcctcagatctgcctgctcagcaacccccactccaggttcaacctctggcaggac
cttcctgagatccagagcagcggggtgctggacatcctccagcctgaggagaccaagctg
caggaggccatgtttgagttggtcacctctgaggcctcctactataagagcctgaacctg
ctggtgtcgcacttcatggagaacgagcggctgaagaagatcctgcacccgtccgaggcc
cacatcctcttctccaatgtcctggatgtcatggctgtcagtgagcggtttttgctagag
ctggaacaccgcatggaggagaacattgtcatctcggatgtgtgtgacatcgtgtaccgt
tatgcggctgatcacttctcggtctatatcacctacgtcagtaaccagacctaccaggaa
aggacgtacaagcaactcctacaggagaagacggcttttcgggaactgatcgcacagctg
gagctggaccccaagtgcaagggcctgcccttgtcctccttcctcatcttgcccttccag
aggatcacgagactcaagctgctggtccagaacatcctgaagagggtggaggaagggtct
gaacgtgaaggcactgccttggatgcccacaaggagctagaaatggtggtaaaggcgtgc
aacgagggtgtccggaagatgagccgcacagaacagatgatcagcattcagaagaagatg
gagttcaagatcaagtcggtacctatcatctcacactcccggtggctgctgaagcaaggt
gaactacagcagatgtccggccccaagacctcccgcaccctgcggaccaagaagctcttc
agagagatttacctcttcctcttcaatgacctgctggtgatctgccggcagatccctgga
gacaagtaccaggtgttcgattccgctccaaggggcctgctgcgagtggaggagctggag
gaccagggccagacactggctaatgtgttcatcctgcggctgctggaaaacgcagatgac
cgggaggccacctatatgctgaaggcatcctcccagagcgagatgaagcgttggatgact
tcactggcccccaacaggaggaccaagtttgtatccttcacatctcggctgttggactgt
ccgcaggtccagtgtgtccacccctacgtggcccagcagcccgatgagctgacactggaa
ctggcagacatcctgaacatcctagagaagacggaggatgggtggatctttggtgagcgg
ctgcatgaccaggagagaggctggttccccagttccatgacagaggagatcctgaacccc
aagatccgctcccaaaacctcaaggaatgtttccgagtgcataagatggaggaccctcag
cgcagccagaataaggaccgcaggaagttgggcagccggaatcgtcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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