KEGG   Rattus norvegicus (rat): 246262
Entry
246262            CDS       T01003                                 
Symbol
Sema3d
Name
(RefSeq) semaphorin-3D
  KO
K06840  semaphorin 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    246262 (Sema3d)
SSDB
Motif
Pfam: Sema Ig_6 PSI ig Ig_3 I-set V-set Ig_2
Other DBs
NCBI-GeneID: 246262
NCBI-ProteinID: NP_001098103
RGD: 727939
Ensembl: ENSRNOG00000007202
UniProt: F1MAG8
Position
4:complement(23271815..23460971)
AA seq 777 aa
MNANKDENPRPRSQDLHLFHAGMMLIVTVLYLPVTETSKQNIPRLKLTYKDLLLSNTCIP
FLGSSEGLDFQTLLLDEERGILLLGAKDHVFLLNLVDLNKNFKKIYWPAAKERVELCKLA
GKDANTECANFIRVLQPYNKTHVYVCGTGAFHPLCGYIDLGANKEELIFKLDMQNLESGR
LKCPFDPQQPFASVMTDEHLYSGTASDFLGKDTAFTRSLGLMQDHHYIRTDISEHYWLNG
AKFIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKW
TTFLKARLVCSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVY
SMADIRAVFNGPYAHKESADHRWVQYDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISF
IRRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVDHVVAEDGQYDVMFLGTDIGTVLKVV
SISKEKWNMEEVVLEELQVFKHPTAILNMELSLKQQQLYVGSWDGLVQLSLHRCDTYGKA
CADCCLARDPYCAWDGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHEAADEKV
IFGIEFNSTFLECIPKSQQASVEWYIQRSGDEHREELKPDERIIKTDYGLLIRSLQKKDS
GIYYCKAQEHTFIHTIVKLTLNVIENEQMENNQRAEYQEGQVKDLLAESRLRYKDYIQIL
SSPNFSLDQYCEQMWYREKRRQRNKGSAKWKHMQEMKKKRNRRHHRDLDELQRSVAT
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgaatgctaataaagatgagaacccaaggcccagaagtcaagatcttcacctttttcat
gctgggatgatgttaatcgtgactgtgctatatcttcctgtcactgaaacatctaaacaa
aatattccacggctcaagctaacctacaaagacttgctgctctcaaacacctgcattccc
tttttgggttcatcagaaggactggatttccagactcttcttttggatgaggagaggggc
atactgctcctaggagccaaagaccatgtcttcctgctcaatctggtagacttgaacaag
aactttaagaagatttattggcctgctgcaaaggaacgagtggaactatgtaaactagct
gggaaagatgccaatacagaatgtgcaaatttcatccgtgtgcttcaaccctacaataag
actcatgtttacgtgtgtggaactggagcatttcatccactgtgtggatatattgatctt
ggagccaacaaggaggaactcatatttaaactagacatgcagaacctggagtctggcaga
ctgaaatgtccctttgatcctcagcagccttttgcttcggtaatgacagatgagcacctc
tactctggaacagcttctgattttcttggcaaagacactgcattcacaagatcccttggg
ctaatgcaggaccaccattacatcagaactgacatttcggaacactactggctcaatgga
gcaaaatttatcggaacgttccccatcccagacacctataatccggacgatgacaaaata
tatttcttctttcgggaatcatctcaggaaggcagtacttctgacagaagcattctttca
agagttgggagagtttgtaagaatgatgtgggtgggcagcggagtctgataaacaaatgg
actacttttcttaaggcaagactggtttgctcaattcctggaagtgatggggcagatact
cactttgatgaacttcaagatatttacttactccctacgagagatgaaagaaatcctgtt
gtgtatggagtctttaccacaaccagttccatcttcaaaggctctgctgtctgtgtgtac
agcatggctgatatcagagcagtttttaacggtccctatgctcataaggaaagtgcagac
catcgttgggtgcaatatgatggaaggataccttatccccgacccggaacgtgtcccagc
aaaacctatgatccactgattaagtccacccgagacttcccagatgatgttatcagtttc
ataaggcggcacccggtgatgtataagtcggtgtatccagtggccggagcacccaccttc
aagagaattaacgtggattacagactgacgcagatagtggtggatcacgtggtcgctgaa
gacggacagtatgatgtcatgtttctcggaacagacattggaaccgtcctgaaagttgtg
agcatttccaaggagaagtggaatatggaggaggtagtcctcgaggagcttcaggtattc
aagcacccaacagccatcttgaacatggagttgtcgctgaagcagcaacagttgtacgtc
ggttcctgggatggattggttcagctctccttgcacagatgcgatacttatgggaaagcc
tgtgcagactgctgtctcgccagagacccttactgtgcttgggatggaaatgcttgctcc
agatatgcacccacttccaaaaggcgagctagacgccaggatgtaaaatatggagaccca
atcactcagtgctgggacatagaagacagcattagtcatgaagcagctgatgaaaaggtg
attttcggaattgaatttaattcaacctttttggaatgtatacctaaatcccaacaagcc
tctgttgagtggtacatccagcggtcaggagatgagcatcgagaagagttgaaacccgat
gaaaggatcatcaaaacggactatgggctactgattcgaagcctgcagaagaaggactct
gggatttattactgcaaagcacaggagcacactttcatccacaccatagtgaagctgact
ttgaatgtcattgagaatgaacagatggaaaataaccagagggcagaataccaggagggg
caggtcaaggatctgttggctgagtcacggttgagatacaaagactacatccaaatcctt
agcagcccaaacttcagcctggaccagtactgtgagcagatgtggtacagggagaagcgg
agacagcgcaacaagggcagcgcaaagtggaagcacatgcaggaaatgaagaagaaacgg
aatcgacggcatcacagagacctggatgagcttcagagatcagtggctacatag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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