KEGG   Rattus norvegicus (rat): 246770
Entry
246770            CDS       T01003                                 
Symbol
Gtf2ird1
Name
(RefSeq) general transcription factor II-I repeat domain-containing protein 1
  KO
K27274  general transcription factor II-I repeat domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    246770 (Gtf2ird1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     246770 (Gtf2ird1)
SSDB
Motif
Pfam: GTF2I
Other DBs
NCBI-GeneID: 246770
NCBI-ProteinID: NP_001001504
RGD: 620856
Ensembl: ENSRNOG00000001478
UniProt: A6J0J3 Q78ZG1
Position
12:27890594..27997506
AA seq 943 aa
MALLGKHCDIPTNGCGSERWNSTFARKDELINSLVSALDSMCSALSKLNTEVACVAVHNE
SVFVMGTEKGRVFLNTRKELQSDFLRFCRGPLWNDPEAGHPKKVQRCEGGGRSIPRSSLE
QCSDVYLLQKMVEEVFDVLYSEAMGRATVVPLPYERLLREPGLLAVQGLPEGLAFRRPAE
YDPKALMAILEHSHRIRFKLRRPPDDGGQDTKALVEMNGISLLPKGSRDCGLHGQASKVS
PQDLTPTATPSSMANFLYSTSMPNHTIRELKQEVPTCPLTPSDLGLGWPVPEPHVPSTQD
FSDCCGQAPAGPAGPLIQNVHASKRILFSIVHDKSEKWDPFIKEMEDINTLRECVQILFN
SRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIH
FIIKRMFDERIFTGNKFTKDPMKLEPASPPEDTATEVCRDSMLDLAGTAWSDMSSVSEDC
GPGTSGEIGMLRPIKIEPEELDIIQVTVSDPSPTSEEMTDSLPGHLPSEDSGYGMEMPAD
KGPSEEPWQEERPAEESPGDVIRPLRKQVEMLFNTKYAKAIGTSEPVKVPYSKFLMHPEE
LFVLGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKRPELLTDGVKEPVMDTQERDSW
DPLVDETPKRQGLQENYNTRLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIK
SNPGSVIIEGLPPGIPFRKPCTFGSQNLERILSVADKIKFTVTRPFQGLIPKPDEDDANR
LGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVKGLPDDIPFRNPNTY
DIHRLEKILKARDHVRMVIINQLQPFGDVCNNAKVPAKDNIPKRKRKRVSEGNSVSSSSS
SSSSSSSNPESVASTNQISLVQWPVYMVDYSGLNVQLPGPLDY
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggccttgctggggaagcattgtgacatccccaccaacggctgtgggtctgagcgctgg
aactccacctttgcccgcaaggacgagctcatcaacagtctggtgtctgccttagactcc
atgtgctcagcgctctccaagctgaacacagaggtggcctgcgtggcggtacacaatgag
agcgtcttcgtgatgggcaccgagaagggaagggtgtttttgaatactcggaaggagcta
cagtcagacttcctcaggttctgccggggacccctgtggaacgatccagaagcaggacac
cctaaaaaggtgcagcgctgcgaaggtggtggccggagcatcccgcggtcctctctggag
cagtgctcggatgtgtacctgctgcagaagatggtagaggaagtgtttgatgttctttat
agtgaggctatgggcagggccaccgtggtacctttgccctatgagaggctgctcagggag
ccggggctactggcggtgcaagggctgcccgagggcctggccttccggagaccagcagaa
tatgaccccaaggcactcatggccattttggagcatagtcaccgaattcggtttaagctc
aggaggcctcctgatgacggtgggcaggacacaaaggcgctggtggagatgaacggtatc
tctctgctacccaaggggtcccgagactgtggtctgcatggccaggcctccaaggtctct
ccccaagacctgacccccaccgccaccccatcctccatggccaacttcctgtacagcact
tcgatgcccaaccacaccatccgggaactcaagcaggaggtgccaacctgcccgttgacc
cccagcgacctgggcttgggctggcctgtgcctgagccccatgtccccagcacccaagat
ttctctgattgctgtggacaggcgcctgcagggcctgctgggcctctcatccagaatgtc
cacgcttccaagcgtatcctcttctccatcgtccacgacaagtcagagaagtgggatccc
ttcatcaaggaaatggaggacatcaacaccctgcgggagtgcgtgcagattctgtttaac
agcagatacgcggaagccctgggcctggaccatatggttcctgtgccctacaggaagatt
gcctgtgaccctgaggctgtggagattgtgggtatcccagacaagatccccttcaagcgg
ccctgcacttatggagtgccgaagctgaagagaattctggaggagcggcacagcattcac
ttcattatcaagaggatgttcgatgagcgcattttcacagggaacaagtttaccaaagac
cccatgaagctggagccagctagcccaccagaagacactgccacagaagtctgtagggac
agcatgctggacctggctgggactgcttggtcagacatgagcagcgtctctgaagactgt
gggccaggaacctcaggagagataggaatgttgaggcctatcaaaatcgagcccgaggag
ctggacattattcaggttactgtctcagatccttcacctacctctgaggagatgactgac
tcactacctgggcatctaccctcagaagattccggttatgggatggaaatgccggctgac
aaaggccccagtgaggaaccgtggcaagaagagaggccggcagaagagagccctggtgat
gtgatcaggcccctccggaagcaggtggaaatgctgttcaacacaaaatatgccaaagcc
attggtacctcagagccagtcaaggtgccctactccaagttcctgatgcacccggaggag
ctcttcgtactgggactgcctgaaggcatctctcttcgaagacccaactgctttgggatt
gccaagctgaggaagattctggaagccagcaacagtatccagtttgtcattaagagaccc
gaactactcactgacggtgtcaaagaacctgttatggacactcaagagagggactcctgg
gaccctcttgtggacgagaccccgaagagacagggccttcaagaaaattacaacaccaga
ctctctcggatcgacatcgccaacacgcttagggaacaagtccaagacctgtttaacaag
aaatacggtgaagctctgggcatcaaatacccagtgcaggtgccctacaagcgaatcaaa
agcaatccaggctcggtaatcatcgaaggcctgccccccgggatcccattccgcaagccc
tgcacctttggctcccagaacctggaaaggatcctctctgtggctgacaagatcaagttc
accgtcaccaggccatttcaaggactcatcccaaagcctgatgaggatgatgccaacaga
ctgggggagaaggtgatcctccgagagcaggtgaaggagctcttcaatgagaaatacggt
gaggccctgggactgaatcggcctgtgctggtcccgtacaagctgatccgggacagcccg
gatgccgtggaggtgaaaggcctcccagatgacatccccttccggaaccccaacacctac
gacatccatcggctggagaagatcctgaaggccagagaccacgtacggatggttatcatc
aaccagctccaaccttttggggatgtctgcaacaatgccaaggtgccagccaaagacaac
attcccaagcgcaagagaaagcgggtctctgaaggcaactcagtctcctcctcttcctct
tcttcatcctcctcgtcctctaatccagagtctgtggcgtccaccaaccagatctccctc
gtgcagtggccagtgtacatggtggactattccggactaaacgtgcagcttccaggcccc
cttgattattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (32)   
   UniProt (2)   
   RefSeq(pep) (30)   
DNA sequence (46)   
   RefSeq(nuc) (30)   
   GenBank (8)   
   EMBL (8)   
Protein domain (1)   
   Pfam (1)   
All databases (88)   

Download RDF
DBGET integrated database retrieval system