KEGG   Rattus norvegicus (rat): 24688
Entry
24688             CDS       T01003                                 
Symbol
Prph
Name
(RefSeq) peripherin
  KO
K07607  peripherin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    24688 (Prph)
   05022 Pathways of neurodegeneration - multiple diseases
    24688 (Prph)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    24688 (Prph)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     24688 (Prph)
SSDB
Motif
Pfam: Filament Filament_head BLOC1_2 Spc29 Laminin_II DUF3944
Other DBs
NCBI-GeneID: 24688
NCBI-ProteinID: NP_036765
RGD: 3414
Ensembl: ENSRNOG00000052880
UniProt: Q496Z5 F1M7P4
Position
7:132096888..132101070
AA seq 474 aa
MPSSASMSHHSSGLRSSISSTSYRRTFGPPPSLSPGAFSYSSSSRFSSSRLLGSGSPSSS
ARLGSFRAPRAGALRLPSERLDFSMAEALNQEFLATRSNEKQELQELNDRFANFIEKVRF
LEQQNAALRGELSQARGQEPARADQLCQQELRELRRELELLGRERDRVQVERDGLAEDLG
ALKQRLEEETRKREDAEHNLVLFRKDVDDATLSRLELERKIESLMDEIEFLKKLHEEELR
DLQVSVESQQVQQVEVEATVKPELTAALRDIRAQYENIAAKNLQEAEEWYKSKYADLSDA
ANRNHEALRQAKQEMNESRRQIQSLTCEVDGLRGTNEALLRQLRELEEQFALEAGGYQAG
AARLEEELRQLKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISVPVHSFASL
SLKTTVPEVEPPQDSHSRKMVLIRTIETRDGEKVVTESQKEQHSELDKSSIHSY
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgccatcttccgccagcatgagccatcactcgtcgggcctccggtccagcatcagctcc
acctcataccgccggaccttcgggccaccgccctcactgtcccccggggctttctcctac
tcatccagctctcgcttctccagcagccgcctgctgggctcggggtccccgagctcctcg
gcgcggctgggcagcttccgtgcccctcgagcgggggccctgcgcttgccctcggagcgc
ctcgacttctccatggccgaggccctcaaccaggagttcctggccactcggagcaacgag
aagcaagagctacaggagctcaacgaccgcttcgccaacttcatcgagaaggtgcgcttc
ctggagcagcagaacgcagccctgcgcggggagctgagccaggcgcggggccaggagccg
gcgcgcgccgaccagctgtgccagcaggagctgcgcgagctgcggcgcgaactggagctg
ctgggccgggagcgcgaccgggtgcaggtggagcgcgacgggctggcggaggacctgggg
gcgctcaagcagaggttagaagaagaaactcgcaagcgggaggatgcggagcacaacctg
gtgctcttccgtaaggacgtggacgacgccacgctgtcccgcctagaactagagcgcaag
atcgaatctctgatggacgaaattgagttcctcaagaagctacacgaagaggagcttcga
gacctgcaggtgagcgtggagagccagcaggtgcagcaggtggaggtagaggcaacagtg
aagccagagctgaccgcggcgctgagggacatccgtgcacagtatgagaacatcgcggcg
aagaatctgcaggaggcagaggagtggtataagtcaaaatacgctgacctgtccgatgct
gccaaccgcaaccatgaggccctacgtcaggccaagcaggagatgaacgagtcccgacgt
cagatccagagtctgacgtgcgaagtggacgggcttcgtggcacgaacgaggcactgctc
agacagttgcgggagctggaggagcagttcgccctggaggctggagggtaccaagcaggc
gcagcacggctggaggaagagcttcgacagctgaaggaagagatggcgaggcacctgcga
gagtaccaggagctcctcaacgtcaagatggccctggacatcgagatagccacctacagg
aagctactggaaggggaagagagccggatctcagtgcccgttcattcctttgcttcccta
agtttaaagacgactgtgcctgaggtggagcctccccaggacagccacagccggaagatg
gttctgatcaggactatcgagactcgggatggggagaaggtggtgacagagtctcagaag
gagcagcacagtgaactggacaagtcttctattcacagctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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