KEGG   Rattus norvegicus (rat): 24747
Entry
24747             CDS       T01003                                 
Symbol
RT1-M3-1
Name
(RefSeq) RT1 class Ib, locus M3-1 precursor
  KO
K06751  MHC class I antigen
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04218  Cellular senescence
rno04514  Cell adhesion molecules
rno04612  Antigen processing and presentation
rno04940  Type I diabetes mellitus
rno05163  Human cytomegalovirus infection
rno05165  Human papillomavirus infection
rno05166  Human T-cell leukemia virus 1 infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05168  Herpes simplex virus 1 infection
rno05169  Epstein-Barr virus infection
rno05170  Human immunodeficiency virus 1 infection
rno05203  Viral carcinogenesis
rno05320  Autoimmune thyroid disease
rno05330  Allograft rejection
rno05332  Graft-versus-host disease
rno05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    24747 (RT1-M3-1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    24747 (RT1-M3-1)
   04145 Phagosome
    24747 (RT1-M3-1)
  09143 Cell growth and death
   04218 Cellular senescence
    24747 (RT1-M3-1)
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    24747 (RT1-M3-1)
   04612 Antigen processing and presentation
    24747 (RT1-M3-1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    24747 (RT1-M3-1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    24747 (RT1-M3-1)
   05170 Human immunodeficiency virus 1 infection
    24747 (RT1-M3-1)
   05168 Herpes simplex virus 1 infection
    24747 (RT1-M3-1)
   05163 Human cytomegalovirus infection
    24747 (RT1-M3-1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    24747 (RT1-M3-1)
   05169 Epstein-Barr virus infection
    24747 (RT1-M3-1)
   05165 Human papillomavirus infection
    24747 (RT1-M3-1)
  09163 Immune disease
   05320 Autoimmune thyroid disease
    24747 (RT1-M3-1)
   05330 Allograft rejection
    24747 (RT1-M3-1)
   05332 Graft-versus-host disease
    24747 (RT1-M3-1)
  09166 Cardiovascular disease
   05416 Viral myocarditis
    24747 (RT1-M3-1)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    24747 (RT1-M3-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    24747 (RT1-M3-1)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
    24747 (RT1-M3-1)
Exosome [BR:rno04147]
 Exosomal proteins
  Proteins found in most exosomes
   24747 (RT1-M3-1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
 Antigens
  24747 (RT1-M3-1)
SSDB
Motif
Pfam: MHC_I C1-set Ig_3 ig C2-set_2 Ig_2
Other DBs
NCBI-GeneID: 24747
NCBI-ProteinID: NP_075210
RGD: 3494
Ensembl: ENSRNOG00000000763
Vega: OTTRNOG00000001434
UniProt: A6KR51 G3V627
Position
20:complement(1329227..1333394)
AA seq 339 aa
MATSNKFSLLLMVVVALAVSRTGAGTHSLRYFHTALSRPGRGEPQYISVGYVDDKLFQRC
DSVEEIPRMEARAPWMEKEGPEYWEELKLKVKSIAQRARARLRTLIRYYNQSEGSSHILQ
WMVACEVGPDMRLLGAHYQAAYDGSDYITLNEDLSSWTAADMVAQITKSELESEGRAEYF
RAYVDGECLELLHRFLQNGKEILQRADPPKAHVTLHPRPEGDVTLRCWALGFYPADITLT
WQLNGEDLTQDMELVETKPSGDGTFQKWASVVVPSGEEQKYTCHVEHEGLPEPLVLKWGG
SSQSFVVIMVIIVIIVILALLGGVLTVVLVYRRRGAGML
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgacctcaaacaagttctctctcctgctgatggtggtggtcgctctggctgttagc
cgaacaggtgctggcacacattcactgcgttatttccacactgccctgtcacggccgggc
cgtggggagcctcaatatatttctgtcggctatgtggatgacaagctgtttcagcgctgt
gatagcgttgaggagattccgaggatggaggcccgtgcaccttggatggagaaggaagga
ccagagtattgggaggagctgaaactcaaagtaaaaagcattgcacaaagagccagagca
agacttcggaccttgatccgctactacaaccagagtgaaggcagttctcacatcctgcag
tggatggttgcctgcgaggtggggccagacatgagacttcttggagcacactatcaggct
gcatatgacggctcggattacatcaccctgaatgaggacctgagctcctggactgcagca
gacatggtggctcagatcacgaagagcgagttagagtcagaaggtagagcagaatacttc
agagcctatgtggatggagagtgcctggagctgctccatagattcctgcagaatggaaaa
gagattcttcagagagcagatcccccaaaggcacatgtgacccttcacccaagacctgaa
ggtgatgtcaccctgaggtgttgggccctgggcttctaccctgctgacatcaccctaacc
tggcagttgaatggggaggacctgacccaggacatggagcttgtggagaccaagccttca
ggggatggaaccttccagaagtgggcatctgtggtggtgccttctggagaggagcagaaa
tacacatgccatgtggagcatgaggggctgcctgagcctcttgtcctgaaatggggagga
tcgtctcagtcctttgtcgtcatcatggtcatcatagtaatcattgttattctggctctc
ctgggaggtgtgctcactgttgttttggtgtacaggaggaggggtgcaggcatgctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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