KEGG   Rattus norvegicus (rat): 24771
Entry
24771             CDS       T01003                                 
Symbol
Sdc4
Name
(RefSeq) syndecan-4 precursor
  KO
K16338  syndecan 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04512  ECM-receptor interaction
rno04514  Cell adhesion molecules
rno04820  Cytoskeleton in muscle cells
rno05205  Proteoglycans in cancer
rno05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    24771 (Sdc4)
   04514 Cell adhesion molecules
    24771 (Sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    24771 (Sdc4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    24771 (Sdc4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    24771 (Sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    24771 (Sdc4)
Proteoglycans [BR:rno00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   24771 (Sdc4)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 24771
NCBI-ProteinID: NP_036781
RGD: 3650
Ensembl: ENSRNOG00000014297
UniProt: P34901 A6JX82
Structure
Position
3:complement(173574239..173592923)
AA seq 202 aa
MAPVCLFAPLLLLLLGGFPVAPGESIRETEVIDPQDLLEGRYFSGALPDDEDAGGLEQDS
DFELSGSGDLDDTEEPRTFPEVISPLVPLDNHIPENAQPGIRVPSEPKELEENEVIPKRV
PSDVGDDDVSNKVSMSSTSQGSNIFERTEVLAALIVGGVVGILFAVFLILLLVYRMKKKD
EGSYDLGKKPIYKKAPTNEFYA
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcgcctgtctgcctgtttgcgccgctgctgctgttgctcctcggaggtttccccgtc
gccccaggcgagtcgattcgagagactgaggtcatagacccccaggacctcctggaaggc
agatacttctctggagccctcccggacgatgaagacgctgggggccttgagcaggactct
gactttgagctgtcgggttccggagatctagatgacacggaggagcccaggaccttccct
gaggtgatttcacccttggtgccactagataaccacatccccgagaatgcccagcctggc
atccgtgtcccctcagagcccaaggaactggaagagaatgaggtcattcccaaaagggtc
ccctccgacgtgggggatgacgatgtgtccaacaaagtgtccatgtccagcacttcccag
ggcagcaacatttttgaaagaactgaggtcttggcagctctgattgtgggcggcgtagtg
ggcatcctcttcgccgttttcctgatcctgctgctggtgtaccgcatgaagaagaaggat
gaaggcagttacgacttgggcaagaaacccatctacaaaaaagcccccaccaacgagttc
tacgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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