KEGG   Rattus norvegicus (rat): 24773
Entry
24773             CDS       T01003                                 
Symbol
Sftpa1
Name
(RefSeq) pulmonary surfactant-associated protein A isoform 3 precursor
  KO
K10067  pulmonary surfactant-associated protein A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno05133  Pertussis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    24773 (Sftpa1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05133 Pertussis
    24773 (Sftpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    24773 (Sftpa1)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:rno04091]
    24773 (Sftpa1)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Phagocytosis
   Opsonins
    24773 (Sftpa1)
Lectins [BR:rno04091]
 C-Type lectins
  Group 3: Collectins
   24773 (Sftpa1)
SSDB
Motif
Pfam: Lectin_C Collagen
Other DBs
NCBI-GeneID: 24773
NCBI-ProteinID: NP_001257576
RGD: 3665
Ensembl: ENSRNOG00000011438
UniProt: P08427
Structure
Position
16:17042264..17045770
AA seq 248 aa
MSLCSLAFTLFLTVVAGIKCNVTDVCAGSPGIPGAPGNHGLPGRDGRDGVKGDPGPPGPM
GPPGGMPGLPGRDGLPGAPGAPGERGDKGEPGERGLPGFPAYLDEELQTELYEIKHQILQ
TMGVLSLQGSMLSVGDKVFSTNGQSVNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKK
YNNYVYLGMIEDQTPGDFHYLDGASVNYTNWYPGEPRGQGKEKCVEMYTDGTWNDRGCLQ
YRLAVCEF
NT seq 747 nt   +upstreamnt  +downstreamnt
atgtcactgtgttctttggccttcaccctcttcttgactgttgtcgctggtatcaagtgc
aatgtgacagacgtttgtgctggaagccctgggatccctggagctcctggaaaccatggt
ctgcctggcagagacgggagagacggtgtcaaaggagaccctggacctccaggtcccatg
ggccctcctggaggaatgccaggtcttcctggacgcgatgggctgcccggagcccctggt
gcacctggagaacgtggagacaagggagagcctggagaaaggggcctgccaggatttcca
gcttacctggatgaggagctccagactgaactctatgagatcaaacatcagattctgcaa
acaatgggagtcctcagcttgcaaggatccatgctgtcagtgggggataaagtcttttcc
accaatgggcagtcagtcaactttgataccattaaagagatgtgtaccagagcaggaggc
aacattgctgtcccgaggactcctgaggagaacgaggccattgcaagtattgcgaagaag
tacaacaactatgtctacttgggcatgattgaagaccagactcctggagacttccactac
ctggatggggcttctgtgaactacaccaactggtacccaggagaacccaggggtcagggc
aaagaaaagtgtgtagaaatgtatacagatgggacatggaatgataggggctgcctgcag
taccggctggctgtttgtgaattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (18)   
   RefSeq(nuc) (4)   
   GenBank (7)   
   EMBL (7)   
3D Structure (15)   
   PDB (15)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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