KEGG   Rattus norvegicus (rat): 24923
Entry
24923             CDS       T01003                                 
Symbol
Stx1b
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
rno04721  Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    24923 (Stx1b)
 09150 Organismal Systems
  09156 Nervous system
   04721 Synaptic vesicle cycle
    24923 (Stx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    24923 (Stx1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    24923 (Stx1b)
Membrane trafficking [BR:rno04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    24923 (Stx1b)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   24923 (Stx1b)
  Exosomal proteins of other body fluids (saliva and urine)
   24923 (Stx1b)
SSDB
Motif
Pfam: Syntaxin SNARE AAA_13 Syntaxin_2 Lzipper-MIP1 Relaxase_C GNVR FAD_binding_1 Baculo_PEP_C YtxH TolA_bind_tri Lge1 Acyl-CoA_dh_2 ETRAMP
Other DBs
NCBI-GeneID: 24923
NCBI-ProteinID: NP_036832
RGD: 3784
Ensembl: ENSRNOG00000019193
UniProt: P61265 A6I9V0
Position
1:complement(191846016..191864878)
AA seq 288 aa
MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggatcggactcaggagctgcggagtgcaaaagacagtgacgatgaagaggaagtg
gttcatgtggatcgagaccactttatggatgagttctttgagcaggtggaagagatccga
ggctgcatcgagaaactgtccgaggatgtggagcaagtgaagaaacagcacagtgccatt
cttgctgcccccaaccccgatgagaagactaaacaggagctggaggacctcacggcagac
atcaaaaagacggcaaacaaggtccggtccaagttgaaagcgatcgagcagagcattgag
caggaagaggggttgaatcgttcttctgcagacctgcgtatccgtaagacccagcactcc
acactctcacggaagttcgtggaggtaatgaccgaatataatgcaactcagtctaagtac
cgggaccgctgcaaggaccgtatccagaggcagctggagatcactggcaggactactacc
aacgaagagctggaagacatgttggaaagcgggaagctggccatcttcacggacgacatc
aaaatggactcgcagatgacaaagcaagccctgaatgagatagagacaaggcacaatgag
atcatcaaactggaaaccagcatccgagagctgcacgacatgtttgtggacatggccatg
ctcgtggagagccagggtgagatgatcgaccgaattgagtacaatgtggaacattctgtg
gactacgtggagcgagccgtgtccgacaccaagaaagctgtgaaatatcagagcaaggcc
aggaggaagaaaattatgatcatcatttgctgtgtggtgctgggggtggtcttggcgtca
tctattggggggacactgggcttgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (35)   

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