KEGG   Rattus norvegicus (rat): 24942
Entry
24942             CDS       T01003                                 
Symbol
Chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
  KO
K23460  Rab proteins geranylgeranyltransferase component A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rno01006]
    24942 (Chm)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    24942 (Chm)
Prenyltransferases [BR:rno01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   24942 (Chm)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    24942 (Chm)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    24942 (Chm)
SSDB
Motif
Pfam: GDI NAD_binding_8 FAD_oxidored
Other DBs
NCBI-GeneID: 24942
NCBI-ProteinID: NP_058763
RGD: 2340
Ensembl: ENSRNOG00000000161
UniProt: P37727
Structure
Position
X:complement(82395463..82554249)
AA seq 650 aa
MADNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK
EYQENNDVVTENSMWQEQILENEEAIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQK
NHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPGPESSPEVNDAEATGK
KENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSQLLYSRGLLI
DLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCV
EYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSETTSCTVDGLKATKKFLQ
CLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF
GQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILAVPAEEPG
SFGVRVIELCSSTMTCMKGTYLVHLTCMSSKTAREDLERVVQKLFTPYTEIEAENEQVEK
PRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNED
FCPAPPNPEDIVLDGDSSQQEVPESSVTPETNSETPKESTVLGNPEEPSE
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcggataatctcccttcggactttgatgtgatcgtaatagggacgggtttgcctgaa
tccatcattgcagctgcatgttcaaggagtggccagagggttctgcatgttgattcaaga
agctactatggaggaaactgggccagtttcagcttttcaggactgttgtcctggctaaag
gaataccaggaaaataatgatgttgtgactgaaaattcaatgtggcaagaacagatactt
gaaaacgaagaagctattcctcttagtagcaaggacaaaacaattcaacatgtagaagta
ttttgttatgccagtcaggatttgcacaaagatgttgaagaagctggtgcactgcagaaa
aatcatgcttctgtgacatctgcacagtccgcagaggctgccgaggctgcagaaacttct
tgccttcctactgcagtggagccattaagcatggggagctgtgaaatacctgcagaacaa
agccagtgccctggtccagagagttcaccagaagtcaatgatgctgaagccacaggaaag
aaagaaaatagtgatgctaaaagttcaacagaagaaccaagtgaaaatgtgcctaaagtc
caagacaacacagagacaccaaagaaaaacagaatcacttactcacagattattaaagaa
ggcagaagatttaacattgatttagtttcacaacttctgtattctcggggattactaatt
gatcttctaatcaaatcaaatgttagtcgatatgcagagtttaaaaatattacgaggatt
cttgcatttcgagaaggaactgtggaacaggttccatgttccagagcagatgtcttcaat
agcaaacaacttactatggtagaaaagcgaatgcttatgaaatttcttacgttttgtgta
gaatatgaagaacatcctgacgagtacagagcatatgagggaactacattttctgaatat
ttaaaaactcaaaaattaacccctaacctacaatattttgtcctgcactcaattgcaatg
acatcagagacaacaagctgtactgtagatggtctcaaagctactaaaaagtttcttcag
tgtcttgggcgatatggcaacactccatttctgtttcctttatatggccaaggagaactt
ccacagtgtttttgcagaatgtgtgctgtatttggtggaatctattgtcttcgccattct
gtacagtgccttgtagtggacaaagaatccagaaaatgtaaagcagtgatagatcagttt
ggtcaaaggataatctctaaacatttcattattgaagacagttacctttctgagaataca
tgttcccgtgtgcaatacaggcaaatatccagggcagtactgattacagatggatctgta
ctaaaaacggatgcagaccaacaggtctccattttggcggtgccagcagaagagccagga
agttttggtgtacgagttattgagttatgctcttcaacaatgacatgcatgaaaggcaca
tatttggtgcatttgacttgcatgtcttctaaaacagcaagagaagatttagaacgggta
gtccagaaattgtttactccgtatacagaaatagaagcagaaaatgaacaggttgaaaag
ccaagacttctatgggcactctacttcaatatgagagactcttcagatatcagcagagat
tgttataatgatttaccatccaatgtctatgtgtgctctggccctgactccggtctagga
aatgataatgcagtcaaacaggcggaaacacttttccagcaaatctgcccaaatgaagac
ttctgtccagccccgccaaatcctgaagatattgttcttgatggagacagctcccaacaa
gaagttccagaatccagtgtcacacccgaaaccaactcagagactcccaaggaaagtaca
gtcctgggaaacccagaagagccttctgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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