KEGG   Rattus norvegicus (rat): 24944
Entry
24944             CDS       T01003                                 
Symbol
Lamp2
Name
(RefSeq) lysosome-associated membrane glycoprotein 2 precursor
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04140  Autophagy - animal
rno04142  Lysosome
rno04145  Phagosome
rno05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    24944 (Lamp2)
   04142 Lysosome
    24944 (Lamp2)
   04140 Autophagy - animal
    24944 (Lamp2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    24944 (Lamp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    24944 (Lamp2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    24944 (Lamp2)
   04090 CD molecules [BR:rno04090]
    24944 (Lamp2)
Membrane trafficking [BR:rno04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    24944 (Lamp2)
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    24944 (Lamp2)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   24944 (Lamp2)
CD molecules [BR:rno04090]
 Proteins
  24944 (Lamp2)
SSDB
Motif
Pfam: Lamp Lamp2_2nd VAS1_LD
Other DBs
NCBI-GeneID: 24944
NCBI-ProteinID: NP_058764
RGD: 2990
Ensembl: ENSRNOG00000000164
UniProt: P17046
Position
X:complement(122038734..122087745)
AA seq 411 aa
MRLLSPVTGSKLVLLFLFLGAVRSDALKLNLTDSKGTCLYAEWEMNFTITYEALKVNETV
TITVPDKVTYNGSSCGDDKNGAKIMIQYGSTLSWAVNFTKEASQYFINNITLSYNTNDTK
TFPGAVPKGILTVIIPVGSQLPLGVIFKCSSVLTFNLSPVVQHYWGIHLQAFVQNGTVSK
HEQVCKEDKTATTVAPIIHTTVPSPTTTLTPTSIPVPTPTVGNYTISNGNATCLLATMGL
QLNITEEKVPFIFNINPAITNFTGSCQPQTAQLRLNNSQIKYLDFIFAVKNEKRFYLKEV
NVNMYLANGSAFHVSNNNLSFWDAPLGSSYMCNKEQVVSVSRTFQINTFNLKVQPFNVTK
GEYSTAQDCSADEDNFLVPIAVGAALGGVLILVLLAYFIGLKRHHTGYEQF
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgcgcctcctctctccggttacgggctcgaagctcgtcctgctctttctgttcctggga
gcagttcggtccgatgcattgaaacttaatttgacagattcaaagggtacttgcctttat
gcagaatgggagatgaatttcacaataacatatgaagctctaaaagtcaatgaaactgta
accattacagtgcctgacaaggtgacatacaatggaagcagttgtggcgatgataagaat
ggtgccaaaataatgatacaatatggatccactctctcttgggctgtgaatttcaccaag
gaagcatctcagtattttattaacaacatcacgctttcttacaacactaatgataccaaa
acatttcctggtgctgtacctaaaggaatccttactgttatcattcctgtgggatcccag
cttccattgggtgtcatctttaagtgcagtagtgttttaactttcaacctgagtcctgtt
gttcagcactattggggcattcacctgcaagcttttgtccaaaatggtacagtgagtaaa
catgaacaagtgtgtaaggaggacaaaactgctaccactgtagcacccatcattcacacc
accgtgccatcgcctactacgacactcactccaacttcaatacccgttccaactccaacg
gttggaaactacaccatttctaatggcaatgctacctgtctgctggctaccatggggctg
cagctgaacatcaccgaggagaaggtgcctttcatttttaacatcaaccctgccataacc
aacttcaccggcagctgtcagccccaaacagctcaacttaggctgaacaacagccaaatt
aagtatctcgactttatctttgctgtgaaaaatgaaaaacggttctatctgaaggaagtg
aatgtcaacatgtatttggctaatggctcagctttccatgtttcaaataacaaccttagc
ttctgggatgctcctctgggaagttcttatatgtgcaacaaagagcaggtggtttccgtg
tctcgaacatttcagataaatacctttaacctgaaggtgcaaccttttaatgtgacgaaa
ggagagtattctacagctcaagactgcagtgcagatgaagacaacttccttgtgcccata
gcggtgggagcagccctgggaggagtacttattctagtgttgctggcttattttattggt
ctcaagcgccatcatactggatatgagcaattttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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