KEGG   Rattus norvegicus (rat): 25009
Entry
25009             CDS       T01003                                 
Symbol
Vars1
Name
(RefSeq) valine--tRNA ligase
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    25009 (Vars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rno01007]
    25009 (Vars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    25009 (Vars1)
Enzymes [BR:rno01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     25009 (Vars1)
Amino acid related enzymes [BR:rno01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   25009 (Vars1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    25009 (Vars1)
 Prokaryotic type
    25009 (Vars1)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 GST_C tRNA-synt_1g tRNA-synt_1_2 GST_C_2 Val_tRNA-synt_C Jag_N tRNA-synt_1e
Other DBs
NCBI-GeneID: 25009
NCBI-ProteinID: NP_445744
RGD: 3950
Ensembl: ENSRNOG00000000867
Vega: OTTRNOG00000001817
UniProt: Q04462 A6KTQ1
Position
20:complement(3810427..3825193)
AA seq 1264 aa
MSILYVSPHPDAFPSLRALIAARYGEAGDGPGWGGPHPRICLQPPPSSRTPFPPPRLPAL
EQGPGGLWVWGAPAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELTPAACGATLPALG
LRGPGQDPQAALGALGKALNPLEEWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLDPSA
RRIWGNVTRWFNTCVRQPEFRAVLGEVVLYSGARSVTQQPGSEITAPQKTAAQLKKEAKK
REKLEKFQQKQKTQQQQPAHGEKKPKPEKKEKRDPGVITYDLPTPPGEKKDVSGTMPDSY
SPQYVEAAWYPWWERQGFFKPEYGRPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAI
QDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFLQEVWKWK
AEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCT
LNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIET
MLGDVAVAVHPKDPRYQHLKGKSVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQND
YEVGQRHRLEAISIMDSKGALVNVPPPFLGLPRFEARKAVLAALKEQGLFRGIKDNPMVV
PLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWC
ISRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAREKAAREFGVSPDKISL
QQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKL
TEKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPSEVE
KAKEGQRADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFA
LRGLGKGFVPSPTSKPEGHESLVDRWIRSRLAEAVRLSNEGFQAYDFPAVTTAQYSFWLY
ELCDVYLECLKPVLNGVDQVAADCARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTP
NAPASLCVTPYPEPSECSWKDPEAEAALELALSITRAVRSLRADYNLTRTRPDCFLEVAD
EATGALASAVSAYVQTLASAGVVAVLALGAPAPQGCAVAVASDRCSIHLQLQGLVDPARE
LGKLQAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEVKLQQTEAELRKVDEAIALF
QKML
NT seq 3795 nt   +upstreamnt  +downstreamnt
atgtccatcctctacgtctctccccaccccgacgccttccccagcctgcgagccctcatc
gctgcccgctacggggaagctggggacggtcccgggtggggaggccctcaccctcgcatc
tgcctgcagcctcccccgagcagccggactccattccccccgcctcgcctgcccgccctg
gagcaggggcctggcggcctgtgggtgtggggggccccggctgtagctcagctgctgtgg
ccagcaggcctgggaggacccgggggcagccgggcagctgtcctggtccagcagtgggtc
agttatgccgacacggagctcacaccagctgcctgcggggcgacgctgcctgctctagga
cttcgaggtcctggtcaggatccccaggctgcccttggggccctgggcaaggccttgaac
cccttggaggaatggcttcgtctgcacacctacctggctggggacgctcccactctggct
gacttagctgctgtgacagccttactgctgcccttccgatacgttctggacccttctgcc
cgccggatctggggtaatgtgactcgctggtttaacacctgtgtccggcaaccagaattc
cgggctgtgctgggagaagtggtcctgtactcaggggccaggtctgtcactcagcagcca
ggttccgagatcactgcaccccaaaagacagctgctcagctcaagaaagaagcaaagaaa
cgggagaaactagagaaattccaacagaagcagaagacgcagcagcagcagccggcacac
ggggagaagaaaccaaaaccagagaagaaggagaagcgagaccccggggtcattacctat
gacctccctaccccacctggggagaagaaagacgtaagtggcaccatgcccgactcctac
agccctcagtatgtggaggctgcctggtacccttggtgggagcggcagggcttcttcaag
ccagagtacgggcgtcctagcgtgtcagcaccaaatccccgaggtgtcttcatgatgtgc
atcccaccccccaacgtgacaggttccctgcacctgggccacgcgctcaccaacgccatc
caggactccctgactcgatggcaccgcatgcggggggagaccaccctatggaacccaggc
tgtgaccatgctggcatcgccacccaggtggtggtggaaaagaaactctggaaagagcgg
ggtctgaaccgtcaccagctgggccgcgaggcctttcttcaggaggtctggaagtggaaa
gcggagaagggtgacaggatttaccaccaattaaagaaacttggcagctccttggactgg
gatcgagcctgcttcaccatggatccaaaattgtcagcaactgtgacagaagcttttgtt
aggctccatgaagaaggggtcatttaccgcagtacccgcctggtcaactggtcctgcacc
ctcaactctgccatttctgacatcgaggtggataagaaagagctgacgggccgcaccctg
ctctctgtgcctggctacaaggagaaggtggagtttggggtcctcgtgtcctttgcctac
aaggtccaaggctcagacagcgacgaggaggtggtggtggcaacaacccggatcgagaca
atgctgggggacgtggctgtggctgtgcaccccaaagatcccagataccagcatttaaag
ggaaagagtgtcgtccacccgttcttgtcccggagccttcccattgtctttgatgacttt
gtggacatggagtttggcacaggtgctgtgaagatcaccccggcccatgaccagaatgac
tatgaggttgggcagcgacataggctggaggccattagcatcatggactcgaagggggcc
cttgtcaatgtgcctccacctttcctgggcctgcccaggtttgaggccaggaaggctgtg
ctggcggccctgaaggagcagggcctgttccgcggcatcaaggacaaccccatggtagtg
ccactatgcaaccgctccaaggatgtggtggagcctctgctaaggccacagtggtacgtg
cgctgtggggagatggctcaggccgccagtgctgccgtgacccggggagacctccgtata
ctgcctgaggcccatcagcggacgtggcattcttggatggacaacatccgagactggtgc
atctctcggcagctgtggtggggccaccgaatccctgcctacttcatcactgtccatgac
ccagcggtaccccctggggaggaccctgatgggcggtactgggtaagcggacgcactgaa
gcagaggcccgggagaaggcagcacgggaatttggagtgtcccctgacaagatcagcctt
cagcaagatgaggatgtgttagacacctggttctcgtctggtctctttcccttctccatc
tttggctggcccaatcagtcagaagatctcagtgtgttctaccctgggaccctgctggag
acgggccatgatatcctcttcttctgggtggcgcgaatggtcatgcttggcctgaagctc
actgagaagctgcccttcagagaggtctacctccatgcaatcgtgcgggacgctcatggc
cggaagatgagcaagtctctcggcaatgtcatcgaccccctggatgtcatccatggagtt
tccttgcagggcctccatgaccaactactgaacagcaacctggatcccagtgaggtggag
aaagccaaagaaggacagagggccgactttccagcagggattcccgagtgtggcactgat
gccctacgctttggactctgtgcctacacatcccaaggtcgagacattaacctggatgtg
aacaggatcctggggtaccgtcacttctgcaacaaactctggaatgccaccaagtttgct
ttgcgcggccttgggaagggctttgtaccctcaccaacctccaagccggaagggcacgag
agcctggtggaccgctggatccgcagccggctggcggaggccgtgaggctcagcaatgaa
ggcttccaggcttatgatttcccagccgtcaccactgcccagtacagcttttggctctat
gagctctgtgatgtctacttggagtgcctaaaacccgttctgaacggagtggaccaggta
gcagcagactgtgctcggcaaaccctctacacctgcctggatgtcggcctgcggctgctc
tcacccttcatgccctttgtcacagaggagctattccagaggctgcctcggcggacacca
aacgctcctgctagcctctgtgtcaccccctacccagagccctcagagtgctcctggaag
gaccctgaagccgaagctgctcttgagctagcgctgagcatcactagagctgtgcgctcc
ctgcgtgcagactacaacctgacccggaccaggcccgactgtttcttggaagtagctgat
gaggctacgggtgccttggcctcggcagtgtcggcctacgtgcagactctggccagtgcg
ggtgtggtggccgtcctggccctgggtgctcccgcaccacagggctgcgctgtggctgtg
gcctcagaccgctgctccatccacctgcagctgcaggggctcgtggacccagcccgggag
ctgggcaagctgcaggccaagcggagtgaggcacagcgacaggctcagcggctgcaggag
cgccgtgctgcctctggctactcagcaaaggtgccccttgaggtccaggaggccgacgaa
gtgaagttacaacagacagaggcggagctcaggaaggtggatgaggccatcgccctgttt
cagaagatgctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (9)   
   Pfam (9)   
All databases (45)   

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