KEGG   Rattus norvegicus (rat): 25027
Entry
25027             CDS       T01003                                 
Symbol
Slc16a1
Name
(RefSeq) monocarboxylate transporter 1
  KO
K08179  MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    25027 (Slc16a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    25027 (Slc16a1)
   04147 Exosome [BR:rno04147]
    25027 (Slc16a1)
Transporters [BR:rno02000]
 Solute carrier family (SLC)
  SLC16: Monocarboxylate transporter
   25027 (Slc16a1)
 Major facilitator superfamily (MFS)
  Organic acid transporters
   Monocarboxylate transporter (MCT) family [TC:2.A.1.13]
    25027 (Slc16a1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   25027 (Slc16a1)
SSDB
Motif
Pfam: MFS_1 CbtA
Other DBs
NCBI-GeneID: 25027
NCBI-ProteinID: NP_036848
RGD: 3690
Ensembl: ENSRNOG00000019996
UniProt: P53987 A6K3P1
Position
2:194805556..194832966
AA seq 494 aa
MPPAIGGPVGYTPPDGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEIIFSATTSEVSW
ISSIMLAVMYAGGPISSILVNKYGSRPVMIAGGCLSGCGLIAASFCNTVQELYFCIGVIG
GLGLAFNLNPALTMIGKYFYKKRPLANGLAMAGSPVFLSTLAPLNQAFFGIFGWRGSFLI
LGGLLLNCCVAGSLMRPIGPQQGKVEKLKSKESLQEAGKSDANTDLIGGSPKGEKLSVFQ
TVNKFLDLSLFTHRGFLLYLSGNVVMFFGLFTPLVFLSNYGKSKHFSSEKSAFLLSILAF
VDMVARPSMGLAANTRWIRPRVQYFFAASVVANGVCHLLAPLSTTYVGFCIYAGVFGFAF
GWLSSVLFETLMDLVGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDMYGDYKYTYWACG
VILIIAGLYLFIGMGINYRLVAKEQKAEEKKRDGKEDETSTDVDEKPKKTMKETQSPAPL
QNSSGDPAEEESPV
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgccacctgcgattggcgggccagtggggtacacccccccagatggaggctggggctgg
gcggtggtagttggagccttcatttctattggcttctcctatgcatttcccaaatccatc
actgtcttctttaaagagattgaaattatattcagtgcaacgaccagtgaagtgtcatgg
atatcgtccatcatgctggctgtcatgtatgccggaggtcctatcagcagtatcttggtg
aataaatatggcagccgtccagtaatgattgctggtggctgcctgtctggctgtggcttg
attgcagcttctttctgtaacacggtgcaggaactttacttctgcattggtgtcattgga
ggtcttgggcttgctttcaacttgaacccagctctgactatgattggcaagtatttctac
aagaagcgaccattggccaatggcctggctatggcaggcagcccagtgttcctctctacc
ctggctccacttaatcaggctttctttggtatttttggctggagaggaagcttcctaatt
cttgggggcctcctcctcaactgttgtgtagctggatccctgatgcgaccaatagggcct
cagcaaggcaaggtggaaaaactcaagtccaaagagtctctccaggaagctgggaagtct
gatgcaaatacagatctcattggaggaagtcccaaaggagaaaagctgtcagtcttccaa
acagttaataaattcctggacttgtccctgtttacccatagaggctttttgctgtacctg
tctggaaatgtggtcatgttctttgggctctttacccctttggtctttcttagtaattat
ggtaagagtaagcatttttccagtgagaagtcagccttcctcctttccattttggctttt
gttgatatggtggccagaccgtccatgggtcttgcagccaacaccaggtggatcagacct
cgagtccagtacttttttgctgcttctgttgttgcgaatggagtgtgccatttgctggca
cctttgtctacgacctatgttgggttctgcatctacgcgggagtctttggatttgccttt
ggttggctcagctccgtattgtttgagacgttgatggacctcgttggaccccagaggttc
tccagtgctgtgggcttggtgaccattgtggaatgttgtcctgtcctcctgggaccacca
cttttaggccgcctcaatgacatgtatggagactacaaatacacatactgggcttgtggc
gtgatcctcatcatcgcaggcctctacctcttcattggtatgggcatcaattatcgactt
gtggccaaagaacagaaagcggaggaaaagaagagggacggtaaagaggacgagaccagc
actgatgttgatgagaagcccaagaagacaatgaaagaaacacagtcgccagcgccactg
cagaacagctctggagaccccgcggaggaggagagcccagtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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