KEGG   Rattus norvegicus (rat): 25098
Entry
25098             CDS       T01003                                 
Symbol
Foxa1
Name
(RefSeq) hepatocyte nuclear factor 3-alpha
  KO
K09387  forkhead box protein A1, hepatocyte nuclear factor 3-alpha
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    25098 (Foxa1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix tissue-specific regulators
    25098 (Foxa1)
SSDB
Motif
Pfam: Forkhead Forkhead_N HNF_C
Other DBs
NCBI-GeneID: 25098
NCBI-ProteinID: NP_036874
RGD: 2807
Ensembl: ENSRNOG00000009284
UniProt: P23512
Position
6:complement(80838380..80871195)
AA seq 468 aa
MLGTVKMEGHESNDWNSYYADTQEAYSSVPVSNMNSGLGSMNSMNTYMTMNTMTTSGNMT
PASFNMSYANPGLGAGLSPGAVAGMPGGSAGAMNSMTAAGVTAMGAALSPGGMGSMGAQP
AASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLIT
MAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGK
GSYWTLHPDSGNMFENGCYLRRQKRFKCEKQPGAGGGSGGGGSKGVPENRKDPSGPVNPS
AESPIHRGVHGKASQLEGAPAPGPAASPQTLDHSGATATGGASELKSPASSSAPPISSGP
GALASVPPSHPAHGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQQHKLDFKAYEQAL
QYSPYGATLPASLPLGSASVATRSPIEPSALEPAYYQGVYSRPVLNTS
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgttagggactgtgaagatggaagggcatgagagcaacgactggaacagctactacgcg
gacacgcaggaggcctactcctctgtcccggtcagcaacatgaactccggcctgggctcc
atgaactccatgaacacctacatgaccatgaacaccatgaccacgagcggcaacatgacc
ccggcttccttcaacatgtcctacgccaacccgggcttaggggccggcctgagtccgggt
gctgtggccggcatgcccgggggctctgcaggcgccatgaacagcatgacggcggcgggc
gtcacagccatgggtgcggcgctgagcccgggaggcatgggctccatgggcgcgcagccc
gcggcctctatgaacggcctgggtccctacgctgccgccatgaacccgtgcatgagtccc
atggcgtacgctccgtccaatctgggccgcagccgcgcggggggcggcggcgacgccaag
acgttcaagcgcagttaccctcacgccaagccgccctactcctacatctcgctcatcacc
atggccatccagcaggcgcccagcaagatgctcacgctgagcgaaatctaccagtggatc
atggacctcttcccctattaccgtcagaaccagcagcgctggcagaactccattcgccac
tcactgtctttcaacgattgtttcgtcaaggtggcgcgatccccggacaagccgggcaag
ggctcctactggacgctgcacccggactccggcaacatgttcgagaacggctgctacttg
cgccgtcaaaagcgcttcaagtgtgagaagcagccgggggccggaggtgggagtgggggc
ggcggctccaagggggtcccagaaaaccgcaaagacccctcaggcccggttaaccccagt
gccgaatcacccattcatcggggtgtgcacggaaaggctagccagctagagggcgcgccg
gcccccgggcccgccgccagcccccagactctggaccacagtggggccacggcgacaggg
ggcgcttcggagttgaagtctccagcttcttcatctgcgccccccataagctccgggcca
ggggcgctggcatctgtacccccctctcacccggcacatggccttgcaccccacgaatct
cagctgcacctgaaaggggacccccactactcctttaaccaccccttctccatcaacaac
ctcatgtcctcctcggagcagcagcacaagctggacttcaaggcatatgagcaggcactg
cagtactctccttacggcgccaccttgcccgccagtctgccccttggcagcgcctcagtg
gccacgaggagccccatcgagccctcagccctggagccggcctactaccaaggtgtgtat
tccagacccgtgctaaatacttcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system